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8YS2

Overall structure of Eastern Equine Encephalitis virus VLP in complex with the receptor VLDLR LA1-2

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D, G, J
(A, D, G, J)
Spike glycoprotein E1polymer44147984.24UniProt (Q4QXJ7)Eastern equine encephalitis virusE1 envelope glycoprotein
2B, E, H, K
(B, E, H, K)
Spike glycoprotein E2polymer42047047.04UniProt (Q4QXJ7)Eastern equine encephalitis virusE2 envelope glycoprotein
3C, F, I, L
(C, F, I, L)
Capsid proteinpolymer26129178.84UniProt (Q4QXJ7)Eastern equine encephalitis virusCoat protein,C
4M, N, O, P
(M, N, O, P)
Very low-density lipoprotein receptorpolymer808854.74UniProt (P98155)Homo sapiens (human)VLDL receptor,VLDL-R
5Q, R, S, T, U...
(M, N, O, P)
CALCIUM IONnon-polymer40.18Chemie (CA)
Sequence modifications
A, D, G, J: 1 - 441 (UniProt: Q4QXJ7)
PDBExternal DatabaseDetails
Ser 82Thr 883conflict
Val 237Ala 1038conflict
Lys 246Arg 1047conflict
Phe 311Ser 1112conflict
Ile 411Leu 1212conflict
B, E, H, K: 1 - 420 (UniProt: Q4QXJ7)
PDBExternal DatabaseDetails
Lys 206Glu 530conflict
C, F, I, L: 1 - 261 (UniProt: Q4QXJ7)
PDBExternal DatabaseDetails
Ser 50Asn 50conflict
Asn 67Lys 67engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains16
Total formula weight532259.2
Non-Polymers*Number of molecules8
Total formula weight320.6
All*Total formula weight532579.8
*Water molecules are not included.

238582

PDB entries from 2025-07-09

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