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8YNQ

ATP-grasp peptide ligase from Streptomyces

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(C, D, A, B)
ATP-grasp peptide ligasepolymer44849193.64Pfam (PF18604)
UniProt (by SIFTS) (A0A6B2YUX8)
Streptomyces albogriseolus 1-36
2E, I
(C)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.22Chemie (ANP)
3F, G, J, K, T...
(C, D, A, B)
GLYCEROLnon-polymer92.16Chemie (GOL)
4H, L, N, P, Q...
(C, D, A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.19Chemie (PEG)
5M
(D)
ADENOSINE MONOPHOSPHATEnon-polymer347.21Chemie (AMP)
6O
(A)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.21Chemie (ADP)
7X
(B)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.11Chemie (TRS)
8AA, BA, Y, Z
(A, B, C, D)
waterwater18.0325Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight196774.5
Non-Polymers*Number of molecules20
Total formula weight3416.6
All*Total formula weight200191.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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