8YK2
Blood group B alpha-1,3-galactosidase AgaBb from Bifidobacterium bifidum, construct T7-tag_24-700
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (B, A) | Alpha-galactosidase | polymer | 700 | 75155.1 | 2 | UniProt (L8B3G2) Pfam (PF13229) | Bifidobacterium bifidum JCM 1254 | |
| 2 | C, D, E (B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 3 | F (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 4 | G (A) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 5 | H, I (B, A) | water | water | 18.0 | 1155 | Chemie (HOH) |
Sequence modifications
B, A: 24 - 700 (UniProt: L8B3G2)
| PDB | External Database | Details |
|---|---|---|
| Met 9 | - | initiating methionine |
| Ala 10 | - | expression tag |
| Ser 11 | - | expression tag |
| Met 12 | - | expression tag |
| Thr 13 | - | expression tag |
| Gly 14 | - | expression tag |
| Gly 15 | - | expression tag |
| Gln 16 | - | expression tag |
| Gln 17 | - | expression tag |
| Met 18 | - | expression tag |
| Gly 19 | - | expression tag |
| Arg 20 | - | expression tag |
| Asp 21 | - | expression tag |
| Pro 22 | - | expression tag |
| Asn 23 | - | expression tag |
| Leu 701 | - | expression tag |
| Glu 702 | - | expression tag |
| His 703 | - | expression tag |
| His 704 | - | expression tag |
| His 705 | - | expression tag |
| His 706 | - | expression tag |
| His 707 | - | expression tag |
| His 708 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 150310.1 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 395.3 | |
| All* | Total formula weight | 150705.5 |
