8YEE
Cryo-EM structure of in vitro reconstituted Light-harvesting complex II trimer
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Chlorophyll a-b binding protein, chloroplastic | polymer | 225 | 24455.6 | 3 | UniProt (P12333) Pfam (PF00504) | Spinacia oleracea (spinach) | Light-harvesting complex II, LHCII type I CAB,LHCP |
| 2 | AA, BA, CA, D, DA... (B, A, C) | CHLOROPHYLL B | non-polymer | 907.5 | 18 | Chemie (CHL) | |||
| 3 | AB, E, EA, F, FA... (C, A, B) | CHLOROPHYLL A | non-polymer | 893.5 | 24 | Chemie (CLA) | |||
| 4 | BB, CB, JA, KA, R... (C, B, A) | Lutein | non-polymer | 568.9 | 6 | Chemie (A1LXP) | |||
| 5 | DB, LA, T (C, B, A) | (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL | non-polymer | 600.9 | 3 | Chemie (NEX) | |||
| 6 | EB, MA, U (C, B, A) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 3 | Chemie (LHG) | |||
| 7 | FB, GB, HB (A, B, C) | water | water | 18.0 | 126 | Chemie (HOH) |
Sequence modifications
A, B, C: 14 - 232 (UniProt: P12333)
| PDB | External Database | Details |
|---|---|---|
| His 233 | - | expression tag |
| His 234 | - | expression tag |
| His 235 | - | expression tag |
| His 236 | - | expression tag |
| His 237 | - | expression tag |
| His 238 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 73366.8 | |
| Non-Polymers* | Number of molecules | 54 |
| Total formula weight | 45163.0 | |
| All* | Total formula weight | 118529.8 |
