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8Y1K

The cryo-EM structure of TdpAB in complex with AMPPNP and PT-DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D, E...
(F, A, B, E, D...)
TdpApolymer58666546.06Pfam (PF01935)
UniProt (by SIFTS) (A0A1J0LSN9)
Thermus antranikianii DSM 12462
2G, H
(H, G)
TdpBpolymer37542757.92UniProt (by SIFTS) (A0A1J0LRX6)Thermus antranikianii DSM 12462
3I
(I)
DNA (5'-D(P*GP*CP*CP*CP*TP*TP*TP*TP*GP*CP*AP*A)-3')polymer123613.41Thermus antranikianii DSM 12462
4J
(J)
DNA (5'-D(P*TP*TP*GP*CP*AP*AP*AP*AP*GP*GP*GP*C)-3')polymer123711.41Thermus antranikianii DSM 12462
5K, L, M
(F, A, B)
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.23Chemie (ANP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight492116.7
Non-Polymers*Number of molecules3
Total formula weight1518.6
All*Total formula weight493635.3
*Water molecules are not included.

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PDB entries from 2025-06-25

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