8XZZ
Structure of a xylanase Xyl-1 M4 E175A in complex with xylobiose
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D (A, B, C, D) | Endo-1,4-beta-xylanase | polymer | 201 | 21502.8 | 4 | UniProt (Q0CMZ1) Pfam (PF00457) | Aspergillus terreus NIH2624 | |
2 | E (E) | beta-D-xylopyranose-(1-4)-beta-D-xylopyranose | branched | 282.2 | 1 | In PDB BIRD (PRD_900116) GlyTouCan (G87728WL) | |||
3 | F, G, H, I, N... (A, B, D) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
4 | J, K, L, M, P... (B, C, D) | beta-D-xylopyranose | non-polymer | 150.1 | 6 | Chemie (XYP) | |||
5 | R, S, T, U (A, B, C, D) | water | water | 18.0 | 740 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 2 - 189 (UniProt: Q0CMZ1)
PDB | External Database | Details |
---|---|---|
Gly -11 | - | expression tag |
Ala -10 | - | expression tag |
Gly -9 | - | expression tag |
Ala -8 | - | expression tag |
Gly -7 | - | expression tag |
Ala -6 | - | expression tag |
Gly -5 | - | expression tag |
Ala -4 | - | expression tag |
Gly -3 | - | expression tag |
Ala -2 | - | expression tag |
Gly -1 | - | expression tag |
Met 0 | - | expression tag |
Glu 1 | - | expression tag |
Pro 31 | Asp 62 | conflict |
Gln 34 | Ala 65 | conflict |
Gln 118 | Lys 149 | conflict |
His 168 | Ala 199 | conflict |
Ala 176 | Glu 207 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 86011.1 | |
Branched | Number of molecules | 1 |
Total formula weight | 282.2 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 1293.2 | |
All* | Total formula weight | 87586.6 |