8XZ9
BA.2.86 Spike in complex with bovine ACE2 (bound 2 ACE2)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E (A, E) | Processed angiotensin-converting enzyme 2 | polymer | 596 | 69701.5 | 2 | UniProt (Q58DD0) Pfam (PF01401) | Bos taurus (Bovine) | |
| 2 | B, C, D (B, C, D) | Spike glycoprotein | polymer | 1120 | 124478.3 | 3 | UniProt (P0DTC2) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) | Severe acute respiratory syndrome coronavirus 2 (2019-nCoV SARS-CoV-2) | S glycoprotein,E2,Peplomer protein |
| 3 | F, G, H, I, J... (F, H, I, J, K...) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 383.3 | 12 | In PDB GlyTouCan (G90333CG) | |||
| 4 | K (L) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) |
Sequence modifications
B, C, D: 28 - 1144 (UniProt: P0DTC2)
| PDB | External Database | Details |
|---|---|---|
| Thr 23 | - | expression tag |
| Thr 24 | - | expression tag |
| Thr 25 | - | expression tag |
| Gln 26 | - | expression tag |
| Ser 27 | - | expression tag |
| Leu 50 | Ser 50 | conflict |
| Phe 127 | Val 127 | conflict |
| Gly 158 | Arg 158 | conflict |
| - | Asn 211 | deletion |
| Ile 212 | Leu 212 | variant |
| Gly 213 | Val 213 | variant |
| Phe 216 | Leu 216 | conflict |
| Asn 245 | His 245 | conflict |
| Asp 264 | Ala 264 | conflict |
| Val 332 | Ile 332 | conflict |
| His 339 | Gly 339 | variant |
| Thr 356 | Lys 356 | conflict |
| Phe 371 | Ser 371 | variant |
| Pro 373 | Ser 373 | variant |
| Phe 375 | Ser 375 | variant |
| Ala 376 | Thr 376 | variant |
| Lys 403 | Arg 403 | conflict |
| Asn 405 | Asp 405 | variant |
| Ser 408 | Arg 408 | variant |
| Asn 417 | Lys 417 | variant |
| Lys 440 | Asn 440 | variant |
| His 445 | Val 445 | conflict |
| Ser 446 | Gly 446 | variant |
| Asp 450 | Asn 450 | conflict |
| Trp 452 | Leu 452 | conflict |
| Lys 460 | Asn 460 | conflict |
| Asn 477 | Ser 477 | conflict |
| Lys 478 | Thr 478 | conflict |
| Lys 481 | Asn 481 | variant |
| - | Val 483 | deletion |
| Lys 484 | Glu 484 | variant |
| Pro 486 | Phe 486 | variant |
| Arg 498 | Gln 498 | variant |
| Tyr 501 | Asn 501 | variant |
| His 505 | Tyr 505 | conflict |
| Lys 554 | Glu 554 | conflict |
| Val 570 | Ala 570 | conflict |
| Gly 614 | Asp 614 | variant |
| Ser 621 | Pro 621 | conflict |
| Tyr 655 | His 655 | variant |
| Lys 764 | Asn 764 | variant |
| Tyr 796 | Asp 796 | variant |
| Pro 817 | Phe 817 | conflict |
| Pro 892 | Ala 892 | conflict |
| Pro 899 | Ala 899 | conflict |
| Phe 939 | Ser 939 | conflict |
| Pro 942 | Ala 942 | conflict |
| His 954 | Gln 954 | variant |
| Lys 969 | Asn 969 | variant |
| Pro 986 | Lys 986 | variant |
| Pro 987 | Val 987 | variant |
| Leu 1143 | Pro 1143 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 512837.9 | |
| Branched | Number of molecules | 13 |
| Total formula weight | 5024.6 | |
| All* | Total formula weight | 517862.5 |
