Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA-directed RNA polymerase IV subunit 1 | polymer | 1498 | 168101.8 | 1 | UniProt (Q9LQ02) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF11523) | Arabidopsis thaliana (thale cress) | DNA-directed RNA polymerase D subunit 1,AtNRPD1a,Nuclear RNA polymerase D 1a,Protein RNA-DIRECTED DNA METHYLATION DEFECTIVE 3,Protein SILENCING DEFECTIVE 4,Protein SILENCING MOVEMENT DEFICIENT 2,RNA polymerase IV subunit 1a,POL IV 1a |
| 2 | B (B) | DNA-directed RNA polymerases IV and V subunit 2 | polymer | 1172 | 132848.0 | 1 | UniProt (Q9LK40) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) Pfam (PF04566) Pfam (PF00562) | Arabidopsis thaliana (thale cress) | DNA-directed RNA polymerase D subunit 2a,AtNRPD2a,Nuclear RNA polymerase D 2a,Nuclear RNA polymerase E 2,Protein DEFECTIVE IN MERISTEM SILENCING 2,Protein DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 2,RNA polymerase IV subunit 2a,POL IV 2a |
| 3 | C (C) | DNA-directed RNA polymerases II, IV and V subunit 3 | polymer | 319 | 35503.2 | 1 | UniProt (Q39211) Pfam (PF01193) Pfam (PF01000) | Arabidopsis thaliana (thale cress) | DNA-directed RNA polymerase II 36 kDa polypeptide A,DNA-directed RNA polymerase II subunit RPB3-A,RNA polymerase II subunit 3-A,RNA polymerase II subunit B3-A |
| 4 | D (D) | DNA-directed RNA polymerases IV and V subunit 4 | polymer | 205 | 22447.6 | 1 | UniProt (Q6DBA5) Pfam (PF03874) | Arabidopsis thaliana (thale cress) | Protein RNA-DIRECTED DNA METHYLATION 2,RNA polymerase II,Rpb4,core protein |
| 5 | E (E) | DNA-directed RNA polymerases II and IV subunit 5A | polymer | 205 | 24340.4 | 1 | UniProt (O81098) Pfam (PF03871) Pfam (PF01191) | Arabidopsis thaliana (thale cress) | RPB5a,DNA-directed RNA polymerase II subunit E,RNA polymerase I,II and III 24.3 kDa subunit,AtRPB24.3 |
| 6 | F (F) | DNA-directed RNA polymerases II, IV and V subunit 6A | polymer | 144 | 16670.3 | 1 | UniProt (Q9FJ98) Pfam (PF01192) | Arabidopsis thaliana (thale cress) | RNA polymerase Rpb6 |
| 7 | G (G) | DNA-directed RNA polymerase IV subunit 7 | polymer | 174 | 19873.3 | 1 | UniProt (Q8LE42) Pfam (PF03876) | Arabidopsis thaliana (thale cress) | |
| 8 | H (H) | DNA-directed RNA polymerases II, IV and V subunit 8B | polymer | 146 | 16626.3 | 1 | UniProt (Q9M1A8) Pfam (PF03870) | Arabidopsis thaliana (thale cress) | RNA polymerase Rpb8 |
| 9 | I (I) | DNA-directed RNA polymerases II, IV and V subunit 9A | polymer | 114 | 13297.1 | 1 | UniProt (Q6NLH0) Pfam (PF02150) Pfam (PF01096) | Arabidopsis thaliana (thale cress) | |
| 10 | J (J) | DNA-directed RNA polymerases II, IV and V subunit 10 | polymer | 71 | 8323.7 | 1 | UniProt (Q8LFJ6) Pfam (PF01194) | Arabidopsis thaliana (thale cress) | DNA-directed RNA Polymerase II subunit L |
| 11 | K (K) | DNA-directed RNA polymerases II, IV and V subunit 11 | polymer | 116 | 13582.3 | 1 | UniProt (Q38859) Pfam (PF13656) | Arabidopsis thaliana (thale cress) | DNA-directed RNA polymerase II 13.6 kDa polypeptide,DNA-directed RNA polymerase II subunit J,DNA-directed RNA polymerase II subunit RPB11,RNA polymerase II subunit B11 |
| 12 | L (L) | DNA-directed RNA polymerases II, IV and V subunit 12 | polymer | 51 | 5905.8 | 1 | UniProt (Q9FLM8) Pfam (PF03604) | Arabidopsis thaliana (thale cress) | DNA-directed RNA Polymerase II subunit K |
| 13 | M (M) | RNA-dependent RNA polymerase 2 | polymer | 1133 | 129494.5 | 1 | UniProt (O82504) Pfam (PF05183) | Arabidopsis thaliana (thale cress) | AtRDRP2,Protein SILENCING MOVEMENT DEFICIENT 1,RNA-directed RNA polymerase 2 |
| 14 | N (N) | Nontemplate_DNA | polymer | 40 | 12512.0 | 1 | synthetic construct | ||
| 15 | O (O) | RNA | polymer | 18 | 5852.5 | 1 | synthetic construct | ||
| 16 | P (Q) | Template_DNA | polymer | 40 | 12111.8 | 1 | synthetic construct | ||
| 17 | Q, S, T, U, V... (A, B, C, I, J...) | ZINC ION | non-polymer | 65.4 | 9 | Chemie (ZN) | |||
| 18 | R (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
A: 1 - 1453 (UniProt: Q9LQ02)
| PDB | External Database | Details |
|---|---|---|
| Gly 1454 | - | expression tag |
| Ser 1455 | - | expression tag |
| Gly 1456 | - | expression tag |
| Ser 1457 | - | expression tag |
| Gly 1458 | - | expression tag |
| Ser 1459 | - | expression tag |
| Asp 1460 | - | expression tag |
| Tyr 1461 | - | expression tag |
| Lys 1462 | - | expression tag |
| Asp 1463 | - | expression tag |
| His 1464 | - | expression tag |
| Asp 1465 | - | expression tag |
| Gly 1466 | - | expression tag |
| Asp 1467 | - | expression tag |
| Tyr 1468 | - | expression tag |
| Lys 1469 | - | expression tag |
| Asp 1470 | - | expression tag |
| His 1471 | - | expression tag |
| Asp 1472 | - | expression tag |
| Ile 1473 | - | expression tag |
| Asp 1474 | - | expression tag |
| Tyr 1475 | - | expression tag |
| Lys 1476 | - | expression tag |
| Asp 1477 | - | expression tag |
| Asp 1478 | - | expression tag |
| Asp 1479 | - | expression tag |
| Asp 1480 | - | expression tag |
| Lys 1481 | - | expression tag |
| Glu 1482 | - | expression tag |
| Asn 1483 | - | expression tag |
| Leu 1484 | - | expression tag |
| Tyr 1485 | - | expression tag |
| Phe 1486 | - | expression tag |
| Gln 1487 | - | expression tag |
| Gly 1488 | - | expression tag |
| His 1489 | - | expression tag |
| His 1490 | - | expression tag |
| His 1491 | - | expression tag |
| His 1492 | - | expression tag |
| His 1493 | - | expression tag |
| His 1494 | - | expression tag |
| His 1495 | - | expression tag |
| His 1496 | - | expression tag |
| His 1497 | - | expression tag |
| His 1498 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 637490.8 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 613.0 | |
| All* | Total formula weight | 638103.8 |
