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8XHM

Crystal structure of Nocardia seriolae dUTP diphosphatase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Deoxyuridine 5'-triphosphate nucleotidohydrolasepolymer19419699.21UniProt (A0A0B8NBT7)Nocardia seriolaedUTPase,dUTP pyrophosphatase
2B
(A)
2'-DEOXYURIDINE 5'-MONOPHOSPHATEnon-polymer308.21Chemie (UMP)
3C
(A)
PHOSPHATE IONnon-polymer95.01Chemie (PO4)
4D, G
(A)
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer122.12Chemie (TRS)
5E, F
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
6H
(A)
waterwater18.045Chemie (HOH)
Sequence modifications
A: 1 - 166 (UniProt: A0A0B8NBT7)
PDBExternal DatabaseDetails
Gly 167-expression tag
Gly 168-expression tag
Gly 169-expression tag
Gly 170-expression tag
Ser 171-expression tag
Leu 172-expression tag
Glu 173-expression tag
Val 174-expression tag
Leu 175-expression tag
Phe 176-expression tag
Gln 177-expression tag
Gly 178-expression tag
Pro 179-expression tag
Gly 180-expression tag
Gly 181-expression tag
Gly 182-expression tag
Gly 183-expression tag
Ser 184-expression tag
Leu 185-expression tag
Glu 186-expression tag
Val 187-expression tag
Asp 188-expression tag
His 189-expression tag
His 190-expression tag
His 191-expression tag
His 192-expression tag
His 193-expression tag
His 194-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight19699.2
Non-Polymers*Number of molecules6
Total formula weight859.7
All*Total formula weight20558.9
*Water molecules are not included.

250835

PDB entries from 2026-03-18

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