8XHM
Crystal structure of Nocardia seriolae dUTP diphosphatase
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Deoxyuridine 5'-triphosphate nucleotidohydrolase | polymer | 194 | 19699.2 | 1 | UniProt (A0A0B8NBT7) | Nocardia seriolae | dUTPase,dUTP pyrophosphatase |
| 2 | B (A) | 2'-DEOXYURIDINE 5'-MONOPHOSPHATE | non-polymer | 308.2 | 1 | Chemie (UMP) | |||
| 3 | C (A) | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 4 | D, G (A) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 2 | Chemie (TRS) | |||
| 5 | E, F (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 2 | Chemie (PEG) | |||
| 6 | H (A) | water | water | 18.0 | 45 | Chemie (HOH) |
Sequence modifications
A: 1 - 166 (UniProt: A0A0B8NBT7)
| PDB | External Database | Details |
|---|---|---|
| Gly 167 | - | expression tag |
| Gly 168 | - | expression tag |
| Gly 169 | - | expression tag |
| Gly 170 | - | expression tag |
| Ser 171 | - | expression tag |
| Leu 172 | - | expression tag |
| Glu 173 | - | expression tag |
| Val 174 | - | expression tag |
| Leu 175 | - | expression tag |
| Phe 176 | - | expression tag |
| Gln 177 | - | expression tag |
| Gly 178 | - | expression tag |
| Pro 179 | - | expression tag |
| Gly 180 | - | expression tag |
| Gly 181 | - | expression tag |
| Gly 182 | - | expression tag |
| Gly 183 | - | expression tag |
| Ser 184 | - | expression tag |
| Leu 185 | - | expression tag |
| Glu 186 | - | expression tag |
| Val 187 | - | expression tag |
| Asp 188 | - | expression tag |
| His 189 | - | expression tag |
| His 190 | - | expression tag |
| His 191 | - | expression tag |
| His 192 | - | expression tag |
| His 193 | - | expression tag |
| His 194 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 19699.2 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 859.7 | |
| All* | Total formula weight | 20558.9 |






