8X47
Crystal structure of DIMT1 in complex with S-adenosyl-L-homocysteine (SAH) from Pyrococcus horikoshii
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Probable ribosomal RNA small subunit methyltransferase A | polymer | 290 | 33365.1 | 1 | UniProt (O59487) In PDB | Pyrococcus horikoshii OT3 | |
2 | A | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 1 | Chemie (SAH) | |||
3 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
4 | A | SULFITE ION | non-polymer | 80.1 | 1 | Chemie (SO3) | |||
5 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 1 | Chemie (EDO) | |||
6 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
7 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
8 | A | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
9 | A | ARGININE | non-polymer | 175.2 | 1 | Chemie (ARG) | |||
10 | water | water | 18.0 | 35 | Chemie (HOH) |
Sequence modifications
A: 23 - 290 (UniProt: O59487)
PDB | External Database | Details |
---|---|---|
Met 1 | - | initiating methionine |
Ser 2 | - | expression tag |
Ser 3 | - | expression tag |
Arg 4 | - | expression tag |
Ile 5 | - | expression tag |
Arg 6 | - | expression tag |
Ile 7 | - | expression tag |
Asn 8 | - | expression tag |
Thr 9 | - | expression tag |
Lys 10 | - | expression tag |
Ser 11 | - | expression tag |
Leu 12 | - | expression tag |
Leu 13 | - | expression tag |
Val 14 | - | expression tag |
Gln 15 | - | expression tag |
Pro 16 | - | expression tag |
Gly 17 | - | expression tag |
Tyr 18 | - | expression tag |
Ser 19 | - | expression tag |
Gly 20 | - | expression tag |
Ser 21 | - | expression tag |
Lys 22 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 33365.1 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1181.0 | |
All* | Total formula weight | 34546.1 |