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8X47

Crystal structure of DIMT1 in complex with S-adenosyl-L-homocysteine (SAH) from Pyrococcus horikoshii

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AProbable ribosomal RNA small subunit methyltransferase Apolymer29033365.11UniProt (O59487)
In PDB
Pyrococcus horikoshii OT3
2AS-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
3AZINC IONnon-polymer65.42Chemie (ZN)
4ASULFITE IONnon-polymer80.11Chemie (SO3)
5A1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6AGLYCEROLnon-polymer92.11Chemie (GOL)
7ADI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
8ATRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
9AARGININEnon-polymer175.21Chemie (ARG)
10waterwater18.035Chemie (HOH)
Sequence modifications
A: 23 - 290 (UniProt: O59487)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Ser 2-expression tag
Ser 3-expression tag
Arg 4-expression tag
Ile 5-expression tag
Arg 6-expression tag
Ile 7-expression tag
Asn 8-expression tag
Thr 9-expression tag
Lys 10-expression tag
Ser 11-expression tag
Leu 12-expression tag
Leu 13-expression tag
Val 14-expression tag
Gln 15-expression tag
Pro 16-expression tag
Gly 17-expression tag
Tyr 18-expression tag
Ser 19-expression tag
Gly 20-expression tag
Ser 21-expression tag
Lys 22-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33365.1
Non-Polymers*Number of molecules9
Total formula weight1181.0
All*Total formula weight34546.1
*Water molecules are not included.

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PDB entries from 2024-08-28

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