8X0Y
Crystal structure of JM-1A in complex with SARS-CoV-2 RBD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | B, A | Spike protein S1 | polymer | 196 | 22002.7 | 2 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 | |
| 2 | E, G | Heavy chain of JM-1A Fab | polymer | 219 | 23049.9 | 2 | Homo sapiens | ||
| 3 | F, I | Light chain of JM-1A Fab | polymer | 212 | 23061.5 | 2 | Homo sapiens | ||
| 4 | C, D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 2 | In PDB GlyTouCan (G21290RB) | |||
| 5 | B | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | F | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
| 7 | water | water | 18.0 | 1042 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 136228.2 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1141.1 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 130.4 | |
| All* | Total formula weight | 137499.7 |
