8X0M
Cryo-EM structure of Semliki Forest virus in complex with its receptor VLDLR(5-fold)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G (A, E, I) | Capsid protein | polymer | 162 | 17848.3 | 3 | UniProt (P03315) Pfam (PF00944) | Semliki Forest virus | |
| 2 | B, E, H (B, F, J) | Spike glycoprotein E2 | polymer | 418 | 46432.8 | 3 | UniProt (A0A0E3T652) Pfam (PF00943) UniProt (by SIFTS) (P03315) | Semliki Forest virus | |
| 3 | C, F, I (C, G, K) | Spike glycoprotein E1 | polymer | 438 | 47489.8 | 3 | UniProt (A0A0F6PP03) Pfam (PF01589) UniProt (by SIFTS) (P03315) | Semliki Forest virus | |
| 4 | J, K (D, H) | Very low-density lipoprotein receptor | polymer | 37 | 4103.4 | 2 | UniProt (P98155) Pfam (PF00057) | Semliki Forest virus | |
| 5 | L, M, N, O, P... (L, M, N, O, P...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 6 | R, S, T (C, G, K) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 7 | U, V (D, H) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 11 |
| Total formula weight | 343519.4 | |
| Branched | Number of molecules | 6 |
| Total formula weight | 2546.4 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 743.8 | |
| All* | Total formula weight | 346809.6 |
