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8WVT

Crystal structure of Lsd18 in complex with ligands

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Putative epoxidase LasCpolymer48852646.72UniProt (B5M9L6)Streptomyces lasalocidi
2C, H
(A, B)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
3D, E, I, J
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.14Chemie (DMS)
PubChem (679)
4F
(A)
(4R,5S)-3-((2R,3S,4S,E)-2,6-diethyl-9-((2R,3R)-2-ethyl-3-methyloxiran-2-yl)-3-hydroxy-4-methylnon-6-enoyl)-4-methyl-5-phenyloxazolidin-2-onenon-polymer485.71Chemie (X9E)
5G, L
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
PubChem (312)
6K
(B)
(4R,5S)-4-methyl-5-phenyl-3-((2R,3S,4S,6E,10E)-2,6,10-triethyl-3-hydroxy-4-methyldodeca-6,10-dienoyl)oxazolidin-2-onenon-polymer469.71Chemie (A1LWM)
7M, N
(A, B)
waterwater18.0806Chemie (HOH)
Sequence modifications
A, B: 17 - 488 (UniProt: B5M9L6)
PDBExternal DatabaseDetails
Met 1-initiating methionine
Asn 2-expression tag
His 3-expression tag
Lys 4-expression tag
Val 5-expression tag
His 6-expression tag
His 7-expression tag
His 8-expression tag
His 9-expression tag
His 10-expression tag
His 11-expression tag
Ile 12-expression tag
Glu 13-expression tag
Gly 14-expression tag
Arg 15-expression tag
His 16-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight105293.4
Non-Polymers*Number of molecules10
Total formula weight2909.8
All*Total formula weight108203.2
*Water molecules are not included.

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PDB entries from 2026-03-25

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