8WQL

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, HG, JI, KH, LC... (BA, BC, BH, BI, BJ...)	LRC1	polymer	254	29443.2	12		Arthrospira sp. FACHB-439
2	B, C, EH, FH (BB, CB, B4, C4)	LCM	polymer	914	102100.6	4		Arthrospira sp. FACHB-439
3	AD, AN, AQ, BC, CD... (OB, QB, SB, VB, XB...)	Allophycocyanin alpha chain	polymer	161	17409.8	64		Arthrospira sp. FACHB-439
4	AC, AH, BD, BH, BN... (PB, RB, TB, WB, YB...)	Allophycocyanin beta chain	polymer	161	17345.7	68		Arthrospira sp. FACHB-439
5	CQ, EN, J, KG, KK... (UB, NF, NK, b4, U4...)	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core	polymer	67	7775.1	12	UniProt (A0A9W3ZBQ2)	Arthrospira sp. FACHB-439
6	EM, JL, MA, ME, Q... (AD, AE, A1, a1, aD...)	Photosystem II protein D1	polymer	359	39675.2	6	UniProt (A0A9W4ENJ6)	Arthrospira sp. FACHB-439	PSII D1 protein,Photosystem II Q(B) protein
7	FM, KL, NA, NE, R... (BD, BE, B1, b1, bD...)	Photosystem II CP47 reaction center protein	polymer	509	56256.8	6	UniProt (A0A9W4EP29)	Arthrospira sp. FACHB-439	PSII 47 kDa protein,Protein CP-47
8	GM, LL, OA, OE, S... (CD, CE, C1, c1, cD...)	Photosystem II CP43 reaction center protein	polymer	469	51546.0	6	UniProt (A0A9W4EL13)	Arthrospira sp. FACHB-439	PSII 43 kDa protein,Protein CP-43
9	HM, ML, PA, PE, T... (DD, DE, D1, d1, dD...)	Photosystem II D2 protein	polymer	352	39521.3	6	UniProt (A0A9W4EL11)	Arthrospira sp. FACHB-439	PSII D2 protein,Photosystem Q(A) protein
10	IM, NL, QA, QE, U... (ED, EE, E1, e1, eD...)	Cytochrome b559 subunit alpha	polymer	82	9344.6	6	UniProt (A0A9W4EIR1)	Arthrospira sp. FACHB-439	PSII reaction center subunit V
11	JM, OL, RA, RE, V... (FD, FE, F1, f1, fD...)	Cytochrome b559 subunit beta	polymer	44	4994.9	6	UniProt (A0A9W3ZAF8)	Arthrospira sp. FACHB-439	PSII reaction center subunit VI
12	KM, PL, SA, SE, W... (HD, HE, H1, h1, hD...)	Photosystem II reaction center protein H	polymer	67	7636.9	6	UniProt (A0A9W3ZFR1)	Arthrospira sp. FACHB-439	PSII-H
13	LM, QL, TA, TE, X... (ID, IE, I1, i1, iD...)	Photosystem II reaction center protein I	polymer	38	4414.3	6	UniProt (A0A9W4EN47)	Arthrospira sp. FACHB-439	PSII-I,PSII 4.4 kDa protein
14	MM, RL, UA, UE, Y... (JD, JE, J1, j1, jD...)	Photosystem II reaction center protein J	polymer	39	3914.6	6	UniProt (A0A9W3ZEX7)	Arthrospira sp. FACHB-439	PSII-J
15	AE, NM, SL, VA, VE... (KD, KE, K1, k1, kD...)	Photosystem II reaction center protein K	polymer	45	4979.0	6	UniProt (A0A9W4EP73)	Arthrospira sp. FACHB-439	PSII-K
16	AA, BE, OM, TL, WA... (LD, LE, L1, l1, lD...)	Photosystem II reaction center protein L	polymer	39	4581.3	6	UniProt (A0A9W3ZAC5)	Arthrospira sp. FACHB-439	PSII-L
17	BA, CE, PM, UL, XA... (MD, ME, M1, m1, mD...)	Photosystem II reaction center protein M	polymer	37	4128.8	6	UniProt (A0A9W3ZMZ9)	Arthrospira sp. FACHB-439	PSII-M
18	CA, DE, QM, VL, YA... (OD, OE, O1, o1, oD...)	Photosystem II extrinsic protein O	polymer	278	30064.8	6	UniProt (A0A9W3ZRB6)	Arthrospira sp. FACHB-439	Photosystem II manganese-stabilizing polypeptide
19	DA, EE, RM, WL, ZA... (QD, QE, Q1, q1, qD...)	PsbQ protein	polymer	164	18641.4	6	UniProt (A0A9W3ZQ11)	Arthrospira sp. FACHB-439
20	AB, AF, EA, FE, SM... (RD, RE, R1, r1, rD...)	Photosystem II reaction center protein Y	polymer	39	4189.1	6	UniProt (A0A9W3ZG21)	Arthrospira sp. FACHB-439
21	BB, BF, FA (SD, SE, S1)	LPP1	polymer	47	4017.9	3		Arthrospira sp. FACHB-439
22	CB, CF, GA, GE, TM... (TD, TE, T1, t1, tD...)	Photosystem II reaction center protein T	polymer	31	3439.2	6	UniProt (A0A9W4EP38)	Arthrospira sp. FACHB-439	PSII-T
23	DB, DF, HA, HE, UM... (UD, UE, U1, u1, uD...)	PsbU	polymer	95	10733.2	6		Arthrospira sp. FACHB-439
24	AM, EB, EF, IA, IE... (VD, VE, V1, v1, vD...)	Photosystem II extrinsic protein V	polymer	163	18165.8	6	UniProt (A0A9W4ELM7)	Arthrospira sp. FACHB-439	PsbV,Cytochrome c-550,Cytochrome c550,Low-potential cytochrome c
25	BM, FB, FF, JA, JE... (XD, XE, X1, x1, xD...)	Photosystem II reaction center protein X	polymer	48	5427.6	6	UniProt (A0A9W3ZPA1)	Arthrospira sp. FACHB-439
26	CM, GB, GF, KA, KE... (YD, YE, Y1, y1, yD...)	Photosystem II reaction center protein Psb30	polymer	43	4692.6	6	UniProt (A0A9W3ZL09)	Arthrospira sp. FACHB-439	Photosystem II reaction center protein Ycf12
27	DM, HB, HF, LA, LE... (ZD, ZE, Z1, z1, zD...)	Photosystem II reaction center protein Z	polymer	63	6848.4	6	UniProt (A0A9W3ZFP8)	Arthrospira sp. FACHB-439	PSII-Z
28	IB, OC, TB, ZC (EF, BG, EK, BL)	LPP2	polymer	150	15788.2	4	UniProt (A0A9W3ZJ52)	Arthrospira sp. FACHB-439
29	EC, GN, KD, NP (QG, QL, gF, gK)	Allophycocyanin beta-18 subunit	polymer	169	18446.8	4	UniProt (A0A9W3ZN25)	Arthrospira sp. FACHB-439
30	JC, MN, PD, TP (VG, VL, mF, mK)	Allophycocyanin-B alpha subunit	polymer	161	18022.7	4	UniProt (A0A9W3ZH43)	Arthrospira sp. FACHB-439
31	AJ, AO, AP, BG, BI... (b2, d2, f2, h2, j2...)	C-phycocyanin alpha subunit	polymer	162	17616.8	72		Arthrospira sp. FACHB-439
32	AG, AI, AK, AL, BJ... (c2, e2, g2, i2, k2...)	Phycocyanin beta subunit	polymer	172	18062.4	72	UniProt (A9UKJ0)	Arthrospira sp. FACHB-439
33	AHA, AIA, AJA, AKA, ALA... (c3, u4, i5, c7, i8...)	PHYCOCYANOBILIN	non-polymer		588.7	348	Chemie (CYC)
34	BRA, DU, MZ, RNA, RQ... (aE, AE, A1, aD, AD...)	CA-MN4-O5 CLUSTER	non-polymer		339.8	6	Chemie (OEX)
35	ADA, BDA, CRA, DRA, EU... (a1, aE, AE, A1, aD...)	CHLORIDE ION	non-polymer		35.5	12	Chemie (CL) PubChem (312)
36	AAA, ABA, AFA, APA, ASA... (B1, C1, d1, cD, bE...)	CHLOROPHYLL A	non-polymer		893.5	210	Chemie (CLA)
37	DT, FFA, GDA, IRA, ITA... (DD, d1, a1, aE, dE...)	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	12	Chemie (PL9) PubChem (23304240) PubChem (20286) PubChem (21881166) PubChem (5375177) PubChem (6323474) PubChem (6325820) PubChem (6433402)
38	AS, DCA, DQA, DX, EX... (CD, D1, dD, LE, c1...)	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	27	Chemie (SQD) PubChem (25147486) PubChem (25235342) PubChem (42607399) PubChem (159321) PubChem (481096) PubChem (5459390) PubChem (102201395) PubChem (134765349) PubChem (9810997) PubChem (9918745) PubChem (10219110) PubChem (10373133) PubChem (14463145)
39	ACA, AGA, AQA, AUA, BGA... (D1, m1, dD, jE, t1...)	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	48	Chemie (LMG)
40	BCA, BFA, BQA, CCA, CQA... (D1, d1, dD, AD, bD...)	DODECYL-BETA-D-MALTOSIDE	non-polymer		510.6	54	Chemie (LMT)
41	AOA, AR, IDA, KRA, MU... (aD, AD, a1, aE, AE...)	BICARBONATE ION	non-polymer		61.0	6	Chemie (BCT) PubChem (769)
42	BOA, BR, DUA, EQA, ET... (aD, AD, lE, eD, DD...)	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	27	Chemie (LHG) PubChem (46936292) PubChem (446440) PubChem (73416066) PubChem (65144) PubChem (9547104) PubChem (13305396) PubChem (11846227) PubChem (138986743)
43	AEA, ARA, ATA, BEA, BU... (b1, zD, cE, XD, CE...)	BETA-CAROTENE	non-polymer		536.9	60	Chemie (BCR) PubChem (573) PubChem (21672398) PubChem (176490061) PubChem (177696266) PubChem (46783370) PubChem (46846294) PubChem (54603957) PubChem (54612003) PubChem (86765360) PubChem (5315709) PubChem (5280489) PubChem (91827292) PubChem (92863345) PubChem (5353436) PubChem (5356616) PubChem (5927371) PubChem (124919640) PubChem (92863346) PubChem (92863347) PubChem (92863348) PubChem (6477957) PubChem (100990628) PubChem (101525094) PubChem (101525095) PubChem (9828626) PubChem (10256668) PubChem (12305639) PubChem (12305640) PubChem (12305642) PubChem (12305644) PubChem (12305647) PubChem (12305652) PubChem (146673260) PubChem (152743364) PubChem (124919639) PubChem (160505766) PubChem (129651951) PubChem (132274419) PubChem (145925599) PubChem (159562859) PubChem (172654026) PubChem (172878405) PubChem (173398668)
44	AX, CW, DW, GCA, JQA... (JE, CE, H1, hD, J1...)	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	24	Chemie (DGD) PubChem (24865462) PubChem (24865463) PubChem (50904896) PubChem (53480668) PubChem (46936671) PubChem (448441) PubChem (447899) PubChem (4629344) PubChem (15991538) PubChem (154573294) PubChem (171123158) PubChem (134746152) PubChem (140529801)
45	COA, CTA, GW, IW, KDA... (aD, dE, DE, a1, aE...)	PHEOPHYTIN A	non-polymer		871.2	12	Chemie (PHO)
46	BTA, HW, QPA, RBA, XS... (dE, DE, dD, D1, DD...)	FE (II) ION	non-polymer		55.8	6	Chemie (FE2) PubChem (27284)
47	DGA, ECA, FQA, HUA, IX... (v1, E1, fD, vE, VE...)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	12	Chemie (HEM)
48	BUA, CGA, CX, EGA, GUA... (kE, u1, KE, v1, uE...)	CALCIUM ION	non-polymer		40.1	18	Chemie (CA) PubChem (271)

Contents of the asymmetric unit

Polymers	Number of chains	445
	Total formula weight	7937927.9
Non-Polymers*	Number of molecules	882
	Total formula weight	584568.5
All*	Total formula weight	8522496.4

*Water molecules are not included.