8WQL

In situ PBS-PSII supercomplex from cyanobacterial Spirulina platensis

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, HG, JI, KH, LC... (BA, BC, BH, BI, BJ...)	LRC1	polymer	254	29443.2	12		Arthrospira sp. FACHB-439
2	B, C, EH, FH (BB, CB, B4, C4)	LCM	polymer	914	102100.6	4		Arthrospira sp. FACHB-439
3	AD, AN, AQ, BC, CD... (OB, QB, SB, VB, XB...)	Allophycocyanin alpha chain	polymer	161	17409.8	64		Arthrospira sp. FACHB-439
4	AC, AH, BD, BH, BN... (PB, RB, TB, WB, YB...)	Allophycocyanin beta chain	polymer	161	17345.7	68		Arthrospira sp. FACHB-439
5	CQ, EN, J, KG, KK... (UB, NF, NK, b4, U4...)	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core	polymer	67	7775.1	12	UniProt (A0A9W3ZBQ2)	Arthrospira sp. FACHB-439
6	EM, JL, MA, ME, Q... (AD, AE, A1, a1, aD...)	Photosystem II protein D1	polymer	359	39675.2	6	UniProt (A0A9W4ENJ6)	Arthrospira sp. FACHB-439	PSII D1 protein,Photosystem II Q(B) protein
7	FM, KL, NA, NE, R... (BD, BE, B1, b1, bD...)	Photosystem II CP47 reaction center protein	polymer	509	56256.8	6	UniProt (A0A9W4EP29)	Arthrospira sp. FACHB-439	PSII 47 kDa protein,Protein CP-47
8	GM, LL, OA, OE, S... (CD, CE, C1, c1, cD...)	Photosystem II CP43 reaction center protein	polymer	469	51546.0	6	UniProt (A0A9W4EL13)	Arthrospira sp. FACHB-439	PSII 43 kDa protein,Protein CP-43
9	HM, ML, PA, PE, T... (DD, DE, D1, d1, dD...)	Photosystem II D2 protein	polymer	352	39521.3	6	UniProt (A0A9W4EL11)	Arthrospira sp. FACHB-439	PSII D2 protein,Photosystem Q(A) protein
10	IM, NL, QA, QE, U... (ED, EE, E1, e1, eD...)	Cytochrome b559 subunit alpha	polymer	82	9344.6	6	UniProt (A0A9W4EIR1)	Arthrospira sp. FACHB-439	PSII reaction center subunit V
11	JM, OL, RA, RE, V... (FD, FE, F1, f1, fD...)	Cytochrome b559 subunit beta	polymer	44	4994.9	6	UniProt (A0A9W3ZAF8)	Arthrospira sp. FACHB-439	PSII reaction center subunit VI
12	KM, PL, SA, SE, W... (HD, HE, H1, h1, hD...)	Photosystem II reaction center protein H	polymer	67	7636.9	6	UniProt (A0A9W3ZFR1)	Arthrospira sp. FACHB-439	PSII-H
13	LM, QL, TA, TE, X... (ID, IE, I1, i1, iD...)	Photosystem II reaction center protein I	polymer	38	4414.3	6	UniProt (A0A9W4EN47)	Arthrospira sp. FACHB-439	PSII-I,PSII 4.4 kDa protein
14	MM, RL, UA, UE, Y... (JD, JE, J1, j1, jD...)	Photosystem II reaction center protein J	polymer	39	3914.6	6	UniProt (A0A9W3ZEX7)	Arthrospira sp. FACHB-439	PSII-J
15	AE, NM, SL, VA, VE... (KD, KE, K1, k1, kD...)	Photosystem II reaction center protein K	polymer	45	4979.0	6	UniProt (A0A9W4EP73)	Arthrospira sp. FACHB-439	PSII-K
16	AA, BE, OM, TL, WA... (LD, LE, L1, l1, lD...)	Photosystem II reaction center protein L	polymer	39	4581.3	6	UniProt (A0A9W3ZAC5)	Arthrospira sp. FACHB-439	PSII-L
17	BA, CE, PM, UL, XA... (MD, ME, M1, m1, mD...)	Photosystem II reaction center protein M	polymer	37	4128.8	6	UniProt (A0A9W3ZMZ9)	Arthrospira sp. FACHB-439	PSII-M
18	CA, DE, QM, VL, YA... (OD, OE, O1, o1, oD...)	Photosystem II extrinsic protein O	polymer	278	30064.8	6	UniProt (A0A9W3ZRB6)	Arthrospira sp. FACHB-439	Photosystem II manganese-stabilizing polypeptide
19	DA, EE, RM, WL, ZA... (QD, QE, Q1, q1, qD...)	PsbQ protein	polymer	164	18641.4	6	UniProt (A0A9W3ZQ11)	Arthrospira sp. FACHB-439
20	AB, AF, EA, FE, SM... (RD, RE, R1, r1, rD...)	Photosystem II reaction center protein Y	polymer	39	4189.1	6	UniProt (A0A9W3ZG21)	Arthrospira sp. FACHB-439
21	BB, BF, FA (SD, SE, S1)	LPP1	polymer	47	4017.9	3		Arthrospira sp. FACHB-439
22	CB, CF, GA, GE, TM... (TD, TE, T1, t1, tD...)	Photosystem II reaction center protein T	polymer	31	3439.2	6	UniProt (A0A9W4EP38)	Arthrospira sp. FACHB-439	PSII-T
23	DB, DF, HA, HE, UM... (UD, UE, U1, u1, uD...)	PsbU	polymer	95	10733.2	6		Arthrospira sp. FACHB-439
24	AM, EB, EF, IA, IE... (VD, VE, V1, v1, vD...)	Photosystem II extrinsic protein V	polymer	163	18165.8	6	UniProt (A0A9W4ELM7)	Arthrospira sp. FACHB-439	PsbV,Cytochrome c-550,Cytochrome c550,Low-potential cytochrome c
25	BM, FB, FF, JA, JE... (XD, XE, X1, x1, xD...)	Photosystem II reaction center protein X	polymer	48	5427.6	6	UniProt (A0A9W3ZPA1)	Arthrospira sp. FACHB-439
26	CM, GB, GF, KA, KE... (YD, YE, Y1, y1, yD...)	Photosystem II reaction center protein Psb30	polymer	43	4692.6	6	UniProt (A0A9W3ZL09)	Arthrospira sp. FACHB-439	Photosystem II reaction center protein Ycf12
27	DM, HB, HF, LA, LE... (ZD, ZE, Z1, z1, zD...)	Photosystem II reaction center protein Z	polymer	63	6848.4	6	UniProt (A0A9W3ZFP8)	Arthrospira sp. FACHB-439	PSII-Z
28	IB, OC, TB, ZC (EF, BG, EK, BL)	LPP2	polymer	150	15788.2	4	UniProt (A0A9W3ZJ52)	Arthrospira sp. FACHB-439
29	EC, GN, KD, NP (QG, QL, gF, gK)	Allophycocyanin beta-18 subunit	polymer	169	18446.8	4	UniProt (A0A9W3ZN25)	Arthrospira sp. FACHB-439
30	JC, MN, PD, TP (VG, VL, mF, mK)	Allophycocyanin-B alpha subunit	polymer	161	18022.7	4	UniProt (A0A9W3ZH43)	Arthrospira sp. FACHB-439
31	AJ, AO, AP, BG, BI... (b2, d2, f2, h2, j2...)	C-phycocyanin alpha subunit	polymer	162	17616.8	72		Arthrospira sp. FACHB-439
32	AG, AI, AK, AL, BJ... (c2, e2, g2, i2, k2...)	Phycocyanin beta subunit	polymer	172	18062.4	72	UniProt (A9UKJ0) Pfam (PF00502)	Arthrospira sp. FACHB-439
33	AHA, AIA, AJA, AKA, ALA... (c3, u4, i5, c7, i8...)	PHYCOCYANOBILIN	non-polymer		588.7	348	Chemie (CYC)
34	BRA, DU, MZ, RNA, RQ... (aE, AE, A1, aD, AD...)	CA-MN4-O5 CLUSTER	non-polymer		339.8	6	Chemie (OEX)
35	ADA, BDA, CRA, DRA, EU... (a1, aE, AE, A1, aD...)	CHLORIDE ION	non-polymer		35.5	12	Chemie (CL)
36	AAA, ABA, AFA, APA, ASA... (B1, C1, d1, cD, bE...)	CHLOROPHYLL A	non-polymer		893.5	210	Chemie (CLA)
37	DT, FFA, GDA, IRA, ITA... (DD, d1, a1, aE, dE...)	2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE	non-polymer		749.2	12	Chemie (PL9)
38	AS, DCA, DQA, DX, EX... (CD, D1, dD, LE, c1...)	1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL	non-polymer		795.1	27	Chemie (SQD)
39	ACA, AGA, AQA, AUA, BGA... (D1, m1, dD, jE, t1...)	1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE	non-polymer		787.2	48	Chemie (LMG)
40	BCA, BFA, BQA, CCA, CQA... (D1, d1, dD, AD, bD...)	DODECYL-BETA-D-MALTOSIDE	non-polymer		510.6	54	Chemie (LMT)
41	AOA, AR, IDA, KRA, MU... (aD, AD, a1, aE, AE...)	BICARBONATE ION	non-polymer		61.0	6	Chemie (BCT)
42	BOA, BR, DUA, EQA, ET... (aD, AD, lE, eD, DD...)	1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE	non-polymer		723.0	27	Chemie (LHG)
43	AEA, ARA, ATA, BEA, BU... (b1, zD, cE, XD, CE...)	BETA-CAROTENE	non-polymer		536.9	60	Chemie (BCR)
44	AX, CW, DW, GCA, JQA... (JE, CE, H1, hD, J1...)	DIGALACTOSYL DIACYL GLYCEROL (DGDG)	non-polymer		949.3	24	Chemie (DGD)
45	COA, CTA, GW, IW, KDA... (aD, dE, DE, a1, aE...)	PHEOPHYTIN A	non-polymer		871.2	12	Chemie (PHO)
46	BTA, HW, QPA, RBA, XS... (dE, DE, dD, D1, DD...)	FE (II) ION	non-polymer		55.8	6	Chemie (FE2)
47	DGA, ECA, FQA, HUA, IX... (v1, E1, fD, vE, VE...)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	12	Chemie (HEM)
48	BUA, CGA, CX, EGA, GUA... (kE, u1, KE, v1, uE...)	CALCIUM ION	non-polymer		40.1	18	Chemie (CA)

Contents of the asymmetric unit

Polymers	Number of chains	445
	Total formula weight	7937927.9
Non-Polymers*	Number of molecules	882
	Total formula weight	584568.5
All*	Total formula weight	8522496.4

*Water molecules are not included.