8WHX
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | E | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF03947) Pfam (PF00181) In PDB | Mycolicibacterium smegmatis MC2 155 | |
2 | F | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) In PDB | Mycolicibacterium smegmatis MC2 155 | |
3 | G | 50S ribosomal protein L4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) In PDB | Mycolicibacterium smegmatis MC2 155 | |
4 | H | 50S ribosomal protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) In PDB | Mycolicibacterium smegmatis MC2 155 | |
5 | I | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) In PDB | Mycolicibacterium smegmatis MC2 155 | |
6 | J | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) In PDB | Mycolicibacterium smegmatis MC2 155 | |
7 | M | 50S ribosomal protein L13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) In PDB | Mycolicibacterium smegmatis MC2 155 | |
8 | N | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) In PDB | Mycolicibacterium smegmatis MC2 155 | |
9 | O | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (A0QSG8) Pfam (PF00828) In PDB | Mycolicibacterium smegmatis MC2 155 | |
10 | Q | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) In PDB | Mycolicibacterium smegmatis MC2 155 | |
11 | R | 50S ribosomal protein L18 | polymer | 127 | 13711.7 | 1 | UniProt (A0QSG5) Pfam (PF00861) In PDB | Mycolicibacterium smegmatis MC2 155 | |
12 | S | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) In PDB | Mycolicibacterium smegmatis MC2 155 | |
13 | T | 50S ribosomal protein L20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) In PDB | Mycolicibacterium smegmatis MC2 155 | |
14 | U | 50S ribosomal protein L21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) In PDB | Mycolicibacterium smegmatis MC2 155 | |
15 | V | 50S ribosomal protein L22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) In PDB | Mycolicibacterium smegmatis MC2 155 | |
16 | W | 50S ribosomal protein L23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) In PDB | Mycolicibacterium smegmatis MC2 155 | |
17 | X | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) In PDB | Mycolicibacterium smegmatis MC2 155 | |
18 | Z | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) In PDB | Mycolicibacterium smegmatis MC2 155 | |
19 | 1 | 50S ribosomal protein L28 | polymer | 64 | 6891.0 | 1 | UniProt (A0QV03) Pfam (PF00830) In PDB | Mycolicibacterium smegmatis MC2 155 | |
20 | 2 | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) In PDB | Mycolicibacterium smegmatis MC2 155 | |
21 | 3 | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) In PDB | Mycolicibacterium smegmatis MC2 155 | |
22 | 5 | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) In PDB | Mycolicibacterium smegmatis MC2 155 | |
23 | 6 | 50S ribosomal protein L33A | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) In PDB | Mycolicibacterium smegmatis MC2 155 | |
24 | 7 | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) In PDB | Mycolicibacterium smegmatis MC2 155 | |
25 | 8 | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) In PDB | Mycolicibacterium smegmatis MC2 155 | |
26 | 4 | 50S ribosomal protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) In PDB | Mycolicibacterium smegmatis MC2 155 | |
27 | A | 23S rRNA | polymer | 3119 | 1011834.8 | 1 | Mycolicibacterium smegmatis MC2 155 | ||
28 | B | 5S rRNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
29 | a | 16S rRNA | polymer | 1528 | 495373.7 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
30 | v | 30S ribosomal protein S22 | polymer | 33 | 4164.3 | 1 | UniProt (A0QR10) Pfam (PF08213) In PDB | Mycolicibacterium smegmatis MC2 155 | |
31 | d | 30S ribosomal protein S3 | polymer | 275 | 30191.2 | 1 | UniProt (A0QSD7) Pfam (PF07650) Pfam (PF00189) In PDB | Mycolicibacterium smegmatis MC2 155 | |
32 | e | 30S ribosomal protein S4 | polymer | 201 | 23415.8 | 1 | UniProt (A0QSL7) Pfam (PF00163) Pfam (PF01479) In PDB | Mycolicibacterium smegmatis MC2 155 | |
33 | f | 30S ribosomal protein S5 | polymer | 214 | 21946.1 | 1 | UniProt (A0QSG6) Pfam (PF00333) Pfam (PF03719) In PDB | Mycolicibacterium smegmatis MC2 155 | |
34 | g | 30S ribosomal protein S6 | polymer | 96 | 10991.6 | 1 | UniProt (A0A8B4QKV6) In PDB | Mycolicibacterium smegmatis MC2 155 | |
35 | h | 30S ribosomal protein S7 | polymer | 156 | 17660.4 | 1 | UniProt (A0QS97) Pfam (PF00177) In PDB | Mycolicibacterium smegmatis MC2 155 | |
36 | i | 30S ribosomal protein S8 | polymer | 132 | 14492.6 | 1 | UniProt (A0QSG3) Pfam (PF00410) In PDB | Mycolicibacterium smegmatis MC2 155 | |
37 | j | 30S ribosomal protein S9 | polymer | 150 | 16794.4 | 1 | UniProt (A0QSP9) Pfam (PF00380) In PDB | Mycolicibacterium smegmatis MC2 155 | |
38 | k | 30S ribosomal protein S10 | polymer | 101 | 11454.3 | 1 | UniProt (A0QSD0) Pfam (PF00338) In PDB | Mycolicibacterium smegmatis MC2 155 | |
39 | l | 30S ribosomal protein S11 | polymer | 138 | 14671.8 | 1 | UniProt (A0QSL6) Pfam (PF00411) In PDB | Mycolicibacterium smegmatis MC2 155 | |
40 | m | 30S ribosomal protein S12 | polymer | 124 | 13896.4 | 1 | UniProt (A0QS96) Pfam (PF00164) In PDB | Mycolicibacterium smegmatis MC2 155 | |
41 | n | 30S ribosomal protein S13 | polymer | 124 | 14249.6 | 1 | UniProt (A0QSL5) Pfam (PF00416) In PDB | Mycolicibacterium smegmatis MC2 155 | |
42 | o | 30S ribosomal protein S14A | polymer | 101 | 11792.7 | 1 | UniProt (A0R550) Pfam (PF00253) In PDB | Mycolicibacterium smegmatis MC2 155 | 30S ribosomal protein S14 |
43 | p | 30S ribosomal protein S15 | polymer | 89 | 10368.1 | 1 | UniProt (A0QVQ3) Pfam (PF00312) In PDB | Mycolicibacterium smegmatis MC2 155 | |
44 | q | 30S ribosomal protein S16 | polymer | 156 | 16795.2 | 1 | UniProt (A0QV37) Pfam (PF00886) In PDB | Mycolicibacterium smegmatis MC2 155 | |
45 | r | 30S ribosomal protein S17 | polymer | 98 | 11127.0 | 1 | UniProt (A0QSE0) Pfam (PF00366) In PDB | Mycolicibacterium smegmatis MC2 155 | |
46 | s | 30S ribosomal protein S18B | polymer | 84 | 9524.2 | 1 | UniProt (A0R7F7) Pfam (PF01084) In PDB | Mycolicibacterium smegmatis MC2 155 | |
47 | t | 30S ribosomal protein S19 | polymer | 93 | 10800.6 | 1 | UniProt (A0QSD5) Pfam (PF00203) In PDB | Mycolicibacterium smegmatis MC2 155 | |
48 | u | 30S ribosomal protein S20 | polymer | 86 | 9556.1 | 1 | UniProt (A0R102) Pfam (PF01649) In PDB | Mycolicibacterium smegmatis MC2 155 | |
49 | c | 30S ribosomal protein S2 | polymer | 277 | 30145.2 | 1 | UniProt (A0QVB8) Pfam (PF00318) In PDB | Mycolicibacterium smegmatis MC2 155 | |
50 | w | Ribosome hibernation promotion factor RafH | polymer | 264 | 29898.9 | 1 | UniProt (A0QZ86) Pfam (PF02482) Pfam (PF16321) In PDB | Mycolicibacterium smegmatis MC2 155 |
Sequence modifications
w: 1 - 258 (UniProt: A0QZ86)
PDB | External Database | Details |
---|---|---|
His 259 | - | expression tag |
His 260 | - | expression tag |
His 261 | - | expression tag |
His 262 | - | expression tag |
His 263 | - | expression tag |
His 264 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 50 |
Total formula weight | 2236000.8 | |
All* | Total formula weight | 2236000.8 |