8W6D
CryoEM structure of NaDC1 in apo state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Solute carrier family 13 member 2 | polymer | 605 | 65934.3 | 2 | UniProt (Q13183) Pfam (PF00939) | Homo sapiens (human) | Na(+)/dicarboxylate cotransporter 1,NaDC-1,Renal sodium/dicarboxylate cotransporter |
| 2 | C, F (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 3 | D, G (A, B) | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | non-polymer | 705.0 | 2 | Chemie (3PH) | |||
| 4 | E, H (A, B) | CHOLESTEROL HEMISUCCINATE | non-polymer | 486.7 | 2 | Chemie (Y01) |
Sequence modifications
A, B: 1 - 592 (UniProt: Q13183)
| PDB | External Database | Details |
|---|---|---|
| Met -12 | - | initiating methionine |
| Ala -11 | - | expression tag |
| Asp -10 | - | expression tag |
| Tyr -9 | - | expression tag |
| Lys -8 | - | expression tag |
| Asp -7 | - | expression tag |
| Asp -6 | - | expression tag |
| Asp -5 | - | expression tag |
| Asp -4 | - | expression tag |
| Lys -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Arg 0 | - | expression tag |
| Val 550 | Ile 550 | variant |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 131868.5 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 2429.4 | |
| All* | Total formula weight | 134297.9 |
