8W3U
Structure of Epimerase Mth373 from the thermophilic pseudomurein-containing methanogen Methanothermobacter thermautotrophicus
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | dTDP-glucose 4,6-dehydratase related protein | polymer | 337 | 40036.2 | 1 | UniProt (O26473) Pfam (PF01370) | Methanothermobacter thermautotrophicus str. Delta H | |
| 2 | B (B) | dTDP-glucose 4,6-dehydratase related protein | polymer | 337 | 40051.2 | 1 | UniProt (O26473) Pfam (PF01370) | Methanothermobacter thermautotrophicus str. Delta H | |
| 3 | C, M (A, B) | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 2 | Chemie (UDP) PubChem (25323044) PubChem (25323048) PubChem (44298965) PubChem (57448939) PubChem (53486216) PubChem (60098857) PubChem (91746160) PubChem (92332560) PubChem (92332561) PubChem (92332562) PubChem (92332563) PubChem (93088131) PubChem (93630083) PubChem (1158) PubChem (6031) PubChem (3084486) PubChem (6101632) PubChem (6604175) PubChem (11811538) PubChem (12049241) | |||
| 4 | D, N (A, B) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 2 | Chemie (NAD) | |||
| 5 | E, F, G, H, I... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 11 | Chemie (EDO) | |||
| 6 | J, K, U (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) PubChem (888) | |||
| 7 | L, V (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) PubChem (312) | |||
| 8 | W, X (A, B) | water | water | 18.0 | 432 | Chemie (HOH) |
Sequence modifications
A: 1 - 313 (UniProt: O26473)
B: 1 - 313 (UniProt: O26473)
| PDB | External Database | Details |
|---|---|---|
| Tyr -23 | - | expression tag |
| Pro -22 | - | expression tag |
| Val -21 | - | expression tag |
| Ala -20 | - | expression tag |
| Ile -19 | - | expression tag |
| Leu -18 | - | expression tag |
| Leu -17 | - | expression tag |
| Asp -16 | - | expression tag |
| Ala -15 | - | expression tag |
| Leu -14 | - | expression tag |
| Tyr -13 | - | expression tag |
| Trp -12 | - | expression tag |
| Glu -11 | - | expression tag |
| His -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Lys -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Glu -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Tyr -23 | - | expression tag |
| Pro -22 | - | expression tag |
| Val -21 | - | expression tag |
| Ala -20 | - | expression tag |
| Ile -19 | - | expression tag |
| Leu -18 | - | expression tag |
| Leu -17 | - | expression tag |
| Asp -16 | - | expression tag |
| Ala -15 | - | expression tag |
| Leu -14 | - | expression tag |
| Tyr -13 | - | expression tag |
| Trp -12 | - | expression tag |
| Glu -11 | - | expression tag |
| His -10 | - | expression tag |
| Asp -9 | - | expression tag |
| Lys -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Glu -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 80087.3 | |
| Non-Polymers* | Number of molecules | 20 |
| Total formula weight | 2961.7 | |
| All* | Total formula weight | 83049.1 |
