8W09
HIV-1 wild-type intasome core
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, I... | Integrase | polymer | 292 | 32658.3 | 8 | UniProt (Q9YUI7) Pfam (PF02022) Pfam (PF00665) Pfam (PF00552) In PDB | Human immunodeficiency virus 1 | |
| 2 | E, N | vDNA | polymer | 90 | 27371.4 | 2 | Human immunodeficiency virus 1 | ||
| 3 | F, O | vDNA | polymer | 27 | 8374.5 | 2 | Human immunodeficiency virus 1 | ||
| 4 | A, I | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 5 | A, I | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | A, I | (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide | non-polymer | 419.4 | 2 | Chemie (DLU) |
Sequence modifications
A, B, C, D, I, K, L, M: 1 - 288 (UniProt: Q9YUI7)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
| Gly 140 | Ser 140 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 332757.8 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1066.8 | |
| All* | Total formula weight | 333824.6 |
