8VUO
Crystal structure of SARS-CoV-2 nsp16/nsp10 in complex with Cap-1 RNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | 2'-O-methyltransferase | polymer | 298 | 33355.2 | 2 | UniProt (P0DTD1) Pfam (PF06460) | Severe acute respiratory syndrome coronavirus 2 | Non-structural protein 16,nsp16 |
| 2 | B, D (B, D) | Non-structural protein 10 | polymer | 139 | 14802.9 | 2 | UniProt (P0DTD1) Pfam (PF09401) | Severe acute respiratory syndrome coronavirus 2 | nsp10,Growth factor-like peptide,GFL |
| 3 | E, F (E, F) | RNA (5'-R(*AP*UP*UP*AP*AP*AP*GP*GP*UP*U)-3') | polymer | 10 | 3201.0 | 2 | Severe acute respiratory syndrome coronavirus 2 | ||
| 4 | G, T (A, C) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) PubChem (888) | |||
| 5 | H, U (A, C) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 2 | Chemie (SAH) PubChem (16760024) PubChem (25210495) PubChem (44361184) PubChem (46936206) PubChem (50989525) PubChem (51380914) PubChem (52224398) PubChem (57544532) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (118374891) PubChem (118560068) PubChem (126969526) PubChem (129105892) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) PubChem (177678424) PubChem (21125603) PubChem (25203782) PubChem (52224400) PubChem (6419189) PubChem (193) PubChem (164157219) PubChem (13792) PubChem (189149) PubChem (439155) PubChem (5284331) PubChem (71170554) PubChem (13231890) | |||
| 6 | AA, DA, I, J, K... (C, D, A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 16 | Chemie (EDO) | |||
| 7 | BA, CA, N, O (D, B) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 8 | EA, FA (E, F) | 7N-METHYL-8-HYDROGUANOSINE-5'-DIPHOSPHATE | non-polymer | 458.2 | 2 | Chemie (M7G) | |||
| 9 | GA, HA, IA, JA, KA... (A, B, C, D, E...) | water | water | 18.0 | 515 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 102718.3 | |
| Non-Polymers* | Number of molecules | 26 |
| Total formula weight | 2988.6 | |
| All* | Total formula weight | 105706.9 |
