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8VSG

SARS-CoV-2 main protease with covalent inhibitor

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
3C-like proteinase nsp5polymer30633825.52UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 23CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2C
(A)
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLnon-polymer209.21Chemie (BTB)
3D, P
(A, B)
(1R,2S,5S)-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-(1-phenylcyclopropane-1-carbonyl)-3-azabicyclo[3.1.0]hexane-2-carboxamidenon-polymer439.52Chemie (A1AD0)
4E, F, G, H, I...
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.113Chemie (DMS)
5M, N
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
6U, V
(A, B)
waterwater18.0182Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight67651.1
Non-Polymers*Number of molecules18
Total formula weight2228.2
All*Total formula weight69879.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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