8VPK
Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (2) | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B (3) | 50S Ribosomal Protein L37 | polymer | 24 | 2841.4 | 1 | UniProt (A0QTP4) | Mycolicibacterium smegmatis MC2 155 | |
| 3 | C (4) | GTPase HflX | polymer | 470 | 50637.1 | 1 | UniProt (A0QVY1) Pfam (PF13167) Pfam (PF16360) Pfam (PF01926) | Mycolicibacterium smegmatis MC2 155 | GTP-binding protein HflX |
| 4 | D (A) | 23S ribosomal RNA | polymer | 3120 | 1012140.9 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 5 | E (B) | 5S ribosomal RNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 6 | F (C) | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) | Mycolicibacterium smegmatis MC2 155 | |
| 7 | G (D) | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) | Mycolicibacterium smegmatis MC2 155 | |
| 8 | H (E) | 50S Ribosomal Protein L4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) | Mycolicibacterium smegmatis MC2 155 | |
| 9 | I (F) | 50S Ribosomal Protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00673) Pfam (PF00281) | Mycolicibacterium smegmatis MC2 155 | |
| 10 | J (G) | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) | Mycolicibacterium smegmatis MC2 155 | |
| 11 | K (H) | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) | Mycolicibacterium smegmatis MC2 155 | |
| 12 | L (I) | 50S ribosomal protein L10 | polymer | 175 | 18035.7 | 1 | UniProt (A0QS62) Pfam (PF00466) | Mycolicibacterium smegmatis MC2 155 | |
| 13 | M (J) | 50S ribosomal protein L11 | polymer | 142 | 15023.4 | 1 | UniProt (A0QS45) Pfam (PF03946) Pfam (PF00298) | Mycolicibacterium smegmatis MC2 155 | |
| 14 | N (K) | 50S Ribosomal Protein L13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) | Mycolicibacterium smegmatis MC2 155 | |
| 15 | O (L) | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) | Mycolicibacterium smegmatis MC2 155 | |
| 16 | P (M) | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (A0QSG8) Pfam (PF00828) | Mycolicibacterium smegmatis MC2 155 | |
| 17 | Q (N) | Large ribosomal subunit protein uL16 | polymer | 138 | 15774.2 | 1 | UniProt (A0QSD8) Pfam (PF00252) | Mycolicibacterium smegmatis MC2 155 | 50S ribosomal protein L16 |
| 18 | R (O) | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) | Mycolicibacterium smegmatis MC2 155 | |
| 19 | S (P) | 50S Ribosomal Protein L18 | polymer | 127 | 13711.7 | 1 | UniProt (I7FGD9) Pfam (PF00861) | Mycolicibacterium smegmatis MC2 155 | |
| 20 | T (Q) | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) | Mycolicibacterium smegmatis MC2 155 | |
| 21 | U (R) | 50S Ribosomal Protein L20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) | Mycolicibacterium smegmatis MC2 155 | |
| 22 | V (S) | 50S Ribosomal Protein L21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) | Mycolicibacterium smegmatis MC2 155 | |
| 23 | W (T) | 50S Ribosomal Protein L22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) | Mycolicibacterium smegmatis MC2 155 | |
| 24 | X (U) | 50S Ribosomal Protein L23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) | Mycolicibacterium smegmatis MC2 155 | |
| 25 | Y (V) | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) | Mycolicibacterium smegmatis MC2 155 | |
| 26 | Z (W) | 50S ribosomal protein L25 | polymer | 215 | 22571.1 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) | Mycolicibacterium smegmatis MC2 155 | General stress protein CTC |
| 27 | AA (X) | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) | Mycolicibacterium smegmatis MC2 155 | |
| 28 | BA (Y) | 50S Ribosomal Protein L28 | polymer | 64 | 6891.0 | 1 | UniProt (I7FJ52) Pfam (PF00830) | Mycolicibacterium smegmatis MC2 155 | |
| 29 | CA (Z) | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) | Mycolicibacterium smegmatis MC2 155 | |
| 30 | DA (b) | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) | Mycolicibacterium smegmatis MC2 155 | |
| 31 | EA (c) | 50S Ribosomal Protein L33 | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) | Mycolicibacterium smegmatis MC2 155 | |
| 32 | FA (d) | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) | Mycolicibacterium smegmatis MC2 155 | |
| 33 | GA (e) | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) | Mycolicibacterium smegmatis MC2 155 | |
| 34 | HA (f) | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) | Mycolicibacterium smegmatis MC2 155 | |
| 35 | IA (g) | 50S Ribosomal Protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) | Mycolicibacterium smegmatis MC2 155 | |
| 36 | JA (4) | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | non-polymer | 521.2 | 1 | Chemie (GCP) | |||
| 37 | KA (A) | ERYTHROMYCIN A | non-polymer | 733.9 | 1 | Chemie (ERY) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 35 |
| Total formula weight | 1536220.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 1255.1 | |
| All* | Total formula weight | 1537476.0 |
