8VPK
Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (2) | 50S ribosomal protein L30 | polymer | 61 | 7022.1 | 1 | UniProt (A0QSG7) Pfam (PF00327) | Mycolicibacterium smegmatis MC2 155 | |
| 2 | B (3) | 50S Ribosomal Protein L37 | polymer | 24 | 2841.4 | 1 | UniProt (A0QTP4) Pfam (PF26427) | Mycolicibacterium smegmatis MC2 155 | |
| 3 | C (4) | GTPase HflX | polymer | 470 | 50637.1 | 1 | UniProt (A0QVY1) Pfam (PF13167) Pfam (PF16360) Pfam (PF01926) | Mycolicibacterium smegmatis MC2 155 | GTP-binding protein HflX |
| 4 | D (A) | 23S ribosomal RNA | polymer | 3120 | 1012140.9 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 5 | E (B) | 5S ribosomal RNA | polymer | 118 | 38061.8 | 1 | GenBank (118168627) | Mycolicibacterium smegmatis MC2 155 | |
| 6 | F (C) | 50S ribosomal protein L2 | polymer | 278 | 30425.9 | 1 | UniProt (A0QSD4) Pfam (PF00181) Pfam (PF03947) | Mycolicibacterium smegmatis MC2 155 | |
| 7 | G (D) | 50S ribosomal protein L3 | polymer | 217 | 23011.4 | 1 | UniProt (A0QSD1) Pfam (PF00297) | Mycolicibacterium smegmatis MC2 155 | |
| 8 | H (E) | 50S Ribosomal Protein L4 | polymer | 215 | 22920.9 | 1 | UniProt (A0QSD2) Pfam (PF00573) | Mycolicibacterium smegmatis MC2 155 | |
| 9 | I (F) | 50S Ribosomal Protein L5 | polymer | 187 | 21152.3 | 1 | UniProt (A0QSG1) Pfam (PF00281) Pfam (PF00673) | Mycolicibacterium smegmatis MC2 155 | |
| 10 | J (G) | 50S ribosomal protein L6 | polymer | 179 | 19483.4 | 1 | UniProt (A0QSG4) Pfam (PF00347) | Mycolicibacterium smegmatis MC2 155 | |
| 11 | K (H) | 50S ribosomal protein L9 | polymer | 151 | 15949.3 | 1 | UniProt (A0R7F6) Pfam (PF01281) Pfam (PF03948) | Mycolicibacterium smegmatis MC2 155 | |
| 12 | L (I) | 50S ribosomal protein L10 | polymer | 175 | 18035.7 | 1 | UniProt (A0QS62) Pfam (PF00466) | Mycolicibacterium smegmatis MC2 155 | |
| 13 | M (J) | 50S ribosomal protein L11 | polymer | 142 | 15023.4 | 1 | UniProt (A0QS45) Pfam (PF03946) Pfam (PF00298) | Mycolicibacterium smegmatis MC2 155 | |
| 14 | N (K) | 50S Ribosomal Protein L13 | polymer | 147 | 16146.7 | 1 | UniProt (A0QSP8) Pfam (PF00572) | Mycolicibacterium smegmatis MC2 155 | |
| 15 | O (L) | 50S ribosomal protein L14 | polymer | 122 | 13400.6 | 1 | UniProt (A0QSF9) Pfam (PF00238) | Mycolicibacterium smegmatis MC2 155 | |
| 16 | P (M) | 50S ribosomal protein L15 | polymer | 147 | 15602.2 | 1 | UniProt (A0QSG8) Pfam (PF00828) | Mycolicibacterium smegmatis MC2 155 | |
| 17 | Q (N) | Large ribosomal subunit protein uL16 | polymer | 138 | 15774.2 | 1 | UniProt (A0QSD8) Pfam (PF00252) | Mycolicibacterium smegmatis MC2 155 | 50S ribosomal protein L16 |
| 18 | R (O) | 50S ribosomal protein L17 | polymer | 199 | 21892.2 | 1 | UniProt (A0QSL9) Pfam (PF01196) | Mycolicibacterium smegmatis MC2 155 | |
| 19 | S (P) | 50S Ribosomal Protein L18 | polymer | 127 | 13711.7 | 1 | UniProt (I7FGD9) Pfam (PF00861) UniProt (by SIFTS) (A0QSG5) | Mycolicibacterium smegmatis MC2 155 | |
| 20 | T (Q) | 50S ribosomal protein L19 | polymer | 113 | 12892.8 | 1 | UniProt (A0QV42) Pfam (PF01245) | Mycolicibacterium smegmatis MC2 155 | |
| 21 | U (R) | 50S Ribosomal Protein L20 | polymer | 129 | 14494.7 | 1 | UniProt (A0QYU6) Pfam (PF00453) | Mycolicibacterium smegmatis MC2 155 | |
| 22 | V (S) | 50S Ribosomal Protein L21 | polymer | 103 | 11055.9 | 1 | UniProt (A0R151) Pfam (PF00829) | Mycolicibacterium smegmatis MC2 155 | |
| 23 | W (T) | 50S Ribosomal Protein L22 | polymer | 153 | 16353.6 | 1 | UniProt (A0QSD6) Pfam (PF00237) | Mycolicibacterium smegmatis MC2 155 | |
| 24 | X (U) | 50S Ribosomal Protein L23 | polymer | 100 | 11047.8 | 1 | UniProt (A0QSD3) Pfam (PF00276) | Mycolicibacterium smegmatis MC2 155 | |
| 25 | Y (V) | 50S ribosomal protein L24 | polymer | 105 | 11228.9 | 1 | UniProt (A0QSG0) Pfam (PF00467) Pfam (PF17136) | Mycolicibacterium smegmatis MC2 155 | |
| 26 | Z (W) | 50S ribosomal protein L25 | polymer | 215 | 22571.1 | 1 | UniProt (A0R3D2) Pfam (PF01386) Pfam (PF14693) | Mycolicibacterium smegmatis MC2 155 | General stress protein CTC |
| 27 | AA (X) | 50S ribosomal protein L27 | polymer | 88 | 9249.6 | 1 | UniProt (A0R150) Pfam (PF01016) | Mycolicibacterium smegmatis MC2 155 | |
| 28 | BA (Y) | 50S Ribosomal Protein L28 | polymer | 64 | 6891.0 | 1 | UniProt (I7FJ52) Pfam (PF00830) UniProt (by SIFTS) (A0QV03) | Mycolicibacterium smegmatis MC2 155 | |
| 29 | CA (Z) | 50S ribosomal protein L29 | polymer | 77 | 8790.9 | 1 | UniProt (A0QSD9) Pfam (PF00831) | Mycolicibacterium smegmatis MC2 155 | |
| 30 | DA (b) | 50S ribosomal protein L32 | polymer | 57 | 6467.7 | 1 | UniProt (A0R3I9) Pfam (PF01783) | Mycolicibacterium smegmatis MC2 155 | |
| 31 | EA (c) | 50S Ribosomal Protein L33 | polymer | 55 | 6468.5 | 1 | UniProt (A0QS39) Pfam (PF00471) | Mycolicibacterium smegmatis MC2 155 | |
| 32 | FA (d) | 50S ribosomal protein L34 | polymer | 47 | 5522.6 | 1 | UniProt (A0R7K0) Pfam (PF00468) | Mycolicibacterium smegmatis MC2 155 | |
| 33 | GA (e) | 50S ribosomal protein L35 | polymer | 64 | 7298.5 | 1 | UniProt (A0QYU7) Pfam (PF01632) | Mycolicibacterium smegmatis MC2 155 | |
| 34 | HA (f) | 50S ribosomal protein L36 | polymer | 37 | 4341.3 | 1 | UniProt (A0QSL4) Pfam (PF00444) | Mycolicibacterium smegmatis MC2 155 | |
| 35 | IA (g) | 50S Ribosomal Protein L31 | polymer | 75 | 8312.5 | 1 | UniProt (A0R215) Pfam (PF01197) | Mycolicibacterium smegmatis MC2 155 | |
| 36 | JA (4) | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | non-polymer | 521.2 | 1 | Chemie (GCP) | |||
| 37 | KA (A) | ERYTHROMYCIN A | non-polymer | 733.9 | 1 | Chemie (ERY) PubChem (12560) PubChem (6364614) PubChem (6604684) PubChem (6713919) PubChem (10034134) PubChem (12358509) PubChem (12358517) PubChem (12966969) PubChem (15986867) PubChem (16212992) PubChem (16213052) PubChem (16219331) PubChem (16757675) PubChem (22489166) PubChem (22836457) PubChem (22836628) PubChem (23229191) PubChem (24797108) PubChem (44451949) PubChem (45107170) PubChem (45107190) PubChem (45107269) PubChem (45107273) PubChem (16219337) PubChem (16401342) PubChem (16759276) PubChem (18397931) PubChem (18528813) PubChem (21550772) PubChem (22836626) PubChem (44317775) PubChem (44547821) PubChem (44563509) PubChem (45107581) PubChem (50987679) PubChem (53393685) PubChem (54359201) PubChem (57357418) PubChem (57893297) PubChem (58594795) PubChem (58593559) PubChem (59022390) PubChem (59062422) PubChem (59064284) PubChem (59093569) PubChem (49867933) PubChem (59284311) PubChem (59511080) PubChem (59897430) PubChem (59903654) PubChem (60009793) PubChem (60024420) PubChem (66639443) PubChem (66899541) PubChem (177390461) PubChem (177679009) PubChem (3255) PubChem (8233) PubChem (9361) PubChem (154401) PubChem (70897564) PubChem (71306958) PubChem (51066560) PubChem (73265320) PubChem (73456721) PubChem (73946784) PubChem (456593) PubChem (467795) PubChem (489009) PubChem (86820632) PubChem (90473776) PubChem (90746906) PubChem (91434318) PubChem (91558259) PubChem (97293608) PubChem (53384904) PubChem (53384913) PubChem (99719271) PubChem (110189186) PubChem (6540620) PubChem (6602506) PubChem (6604221) PubChem (124226124) PubChem (124518166) PubChem (124604978) PubChem (124605145) PubChem (124605175) PubChem (124723146) PubChem (124798369) PubChem (124762348) PubChem (124822557) PubChem (9833120) PubChem (10032882) PubChem (129009922) PubChem (129125718) PubChem (129445574) PubChem (129445576) PubChem (129666958) PubChem (10897911) PubChem (132274086) PubChem (57358551) PubChem (133126690) PubChem (133126790) PubChem (133550114) PubChem (133688268) PubChem (134081643) PubChem (134081274) PubChem (134693955) PubChem (57587180) PubChem (11970254) PubChem (12358519) PubChem (12358515) PubChem (12358508) PubChem (137705094) PubChem (139247122) PubChem (141945645) PubChem (146158524) PubChem (157254288) PubChem (163003493) PubChem (163003495) PubChem (165844830) PubChem (169440260) PubChem (172897573) PubChem (59974395) PubChem (60044171) PubChem (60086513) PubChem (66577477) PubChem (71024089) PubChem (89970519) PubChem (90472408) PubChem (97293607) PubChem (99719272) PubChem (118725304) PubChem (124226125) PubChem (124523502) PubChem (124604979) PubChem (124605144) PubChem (124605146) PubChem (124716782) PubChem (124716783) PubChem (124723147) PubChem (124762349) PubChem (124822555) PubChem (124822558) PubChem (124870987) PubChem (126969058) PubChem (129010384) PubChem (129119817) PubChem (129445575) PubChem (129627840) PubChem (129628729) PubChem (131665174) PubChem (133562871) PubChem (133602826) PubChem (134081264) PubChem (134693174) PubChem (135026875) PubChem (138113460) PubChem (138403276) PubChem (140886742) PubChem (141646830) PubChem (145774355) PubChem (155899868) PubChem (155900413) PubChem (161123720) PubChem (163003494) PubChem (163003496) PubChem (166604455) PubChem (166639762) PubChem (169289157) PubChem (171114703) PubChem (172897571) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 35 |
| Total formula weight | 1536220.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 1255.1 | |
| All* | Total formula weight | 1537476.0 |
