8VMV
Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 600s
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | C, D | DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3') | polymer | 13 | 3916.6 | 2 | synthetic construct | ||
| 2 | c, d | DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3') | polymer | 8 | 2475.7 | 2 | synthetic construct | ||
| 3 | A, B | Intron-encoded endonuclease I-PpoI | polymer | 162 | 17680.0 | 2 | UniProt (Q94702) Pfam (PF05551) In PDB | Physarum polycephalum | I-Ppo |
| 4 | C, D, A | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 5 | d, B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | d | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 7 | A, B | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 8 | water | water | 18.0 | 353 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 48144.5 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 793.7 | |
| All* | Total formula weight | 48938.3 |
