8VHE
Crystal Structure of Human IDH1 R132Q in Complex with NADPH-TCEP Adduct
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Isocitrate dehydrogenase [NADP] cytoplasmic | polymer | 430 | 48500.1 | 4 | UniProt (O75874) Pfam (PF00180) In PDB | Homo sapiens (human) | IDH,IDH1,Cytosolic NADP-isocitrate dehydrogenase,IDPc,NADP(+)-specific ICDH,Oxalosuccinate decarboxylase |
2 | A, B, C, D | 3,3',3''-({(4R)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1,4-dihydropyridin-4-yl}-lambda~5~-phosphanetriyl)tripropanoic acid | non-polymer | 995.6 | 4 | Chemie (A1AAX) | |||
3 | A, B, C, D | GLYCEROL | non-polymer | 92.1 | 9 | Chemie (GOL) | |||
4 | D, A, B, C | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
5 | D, A, B, C | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
6 | B, C, D | THIOCYANATE ION | non-polymer | 58.1 | 3 | Chemie (SCN) | |||
7 | water | water | 18.0 | 933 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 414 (UniProt: O75874)
PDB | External Database | Details |
---|---|---|
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Gln 132 | Arg 132 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 194000.5 | |
Non-Polymers* | Number of molecules | 24 |
Total formula weight | 5287.6 | |
All* | Total formula weight | 199288.1 |