8VH1
CH235.12 Fab bound to the HIV-1 CH505.M5 SOSIP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, I (A, E, I) | CH505.M5 SOSIP gp120 | polymer | 464 | 52025.3 | 3 | UniProt (M4M0W3) | Human immunodeficiency virus 1 | Env polyprotein |
| 2 | B, F, J (B, F, J) | CH505.M5 SOSIP gp41 | polymer | 158 | 17932.5 | 3 | UniProt (M4M0W3) UniProt (by SIFTS) (D0PUM0) | Human immunodeficiency virus 1 | Env polyprotein |
| 3 | C, G, K (C, G, K) | CH235.I60 Fab Heavy Chain | polymer | 220 | 23684.5 | 3 | Homo sapiens (human) | ||
| 4 | D, H, L (D, H, L) | CH235.I60 Fab Light Chain | polymer | 211 | 23113.6 | 3 | Homo sapiens (human) |
Sequence modifications
A, E, I: 34 - 504 (UniProt: M4M0W3)
B, F, J: 507 - 664 (UniProt: M4M0W3)
| PDB | External Database | Details |
|---|---|---|
| Ala 31 | - | expression tag |
| Glu 32 | - | expression tag |
| Asn 33 | - | expression tag |
| Leu 34 | Met 30 | conflict |
| Lys 64 | Glu 60 | conflict |
| Lys 488 | Glu 473 | conflict |
| Ile 489 | Val 474 | conflict |
| Glu 490 | Lys 475 | conflict |
| Arg 498 | Asn 483 | conflict |
| Cys 499 | Ala 484 | conflict |
| Lys 500 | Arg 485 | conflict |
| Gly 505 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Arg 507 | Glu 490 | conflict |
| Arg 509 | Glu 492 | conflict |
| Arg 510 | Lys 493 | conflict |
| Ile 515 | Met 498 | conflict |
| Met 535 | Ile 518 | conflict |
| Asn 543 | Gln 526 | conflict |
| Arg 557 | Lys 540 | conflict |
| Pro 559 | Ile 542 | conflict |
| Leu 565 | Met 548 | conflict |
| Val 583 | Leu 566 | conflict |
| Arg 588 | Lys 571 | conflict |
| Ile 595 | Met 578 | conflict |
| Cys 605 | Thr 588 | conflict |
| Pro 609 | Tyr 592 | conflict |
| Arg 617 | Lys 600 | conflict |
| Asn 618 | Thr 601 | conflict |
| Leu 619 | Tyr 602 | conflict |
| Ser 620 | Gly 603 | conflict |
| Glu 621 | Asp 604 | conflict |
| Leu 629 | Met 612 | conflict |
| Asp 632 | Glu 615 | conflict |
| Lys 633 | Arg 616 | conflict |
| Gln 640 | Glu 623 | conflict |
| Gly 644 | Glu 627 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 350267.8 | |
| All* | Total formula weight | 350267.8 |






