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8VFI

Ternary DNA Polymerase Beta bound to DNA containing primer terminal FapydG base-paired with a dA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(T)
DNA (5'-D(*CP*CP*GP*AP*CP*GP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3')polymer164853.21synthetic construct
2B
(P)
DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*(FAP))-3')polymer103119.01synthetic construct
3C
(D)
DNA (5'-D(P*GP*TP*CP*GP*G)-3')polymer51536.01synthetic construct
4D
(A)
DNA polymerase betapolymer33538241.71UniProt (P06746)
Pfam (PF14716)
Pfam (PF10391)
Pfam (PF14792)
Pfam (PF14791)
Homo sapiens (human)
5E, F
(A)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6G, H
(A)
SODIUM IONnon-polymer23.02Chemie (NA)
7I, J, K
(A)
CHLORIDE IONnon-polymer35.53Chemie (CL)
8L
(A)
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATEnon-polymer467.21Chemie (DCP)
9M, N, O, P
(T, P, D, A)
waterwater18.0424Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight47749.9
Non-Polymers*Number of molecules8
Total formula weight668.1
All*Total formula weight48418.0
*Water molecules are not included.

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PDB entries from 2025-06-11

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