8VF4
CryoEM structure of Ku homodimer super-complex with hairpin DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, I, J, K... (A, B, I, J, K...) | Non-homologous end joining protein Ku | polymer | 295 | 33609.9 | 6 | UniProt (P9WKD9) Pfam (PF02735) | Mycobacterium tuberculosis H37Rv | Mt-Ku |
| 2 | C, E, G (C, E, G) | DNA (21-mer) | polymer | 21 | 6506.2 | 3 | synthetic construct | ||
| 3 | D, F, H (D, F, H) | DNA (34-MER) | polymer | 34 | 10325.7 | 3 | synthetic construct |
Sequence modifications
A, B, I, J, K, L: 1 - 273 (UniProt: P9WKD9)
| PDB | External Database | Details |
|---|---|---|
| Met -21 | - | initiating methionine |
| Gly -20 | - | expression tag |
| His -19 | - | expression tag |
| His -18 | - | expression tag |
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| His -6 | - | expression tag |
| Ile -5 | - | expression tag |
| Glu -4 | - | expression tag |
| Gly -3 | - | expression tag |
| Arg -2 | - | expression tag |
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 252155.0 | |
| All* | Total formula weight | 252155.0 |






