8VCV
Lineage IV Lassa virus glycoprotein (Josiah) in complex with rabbit polyclonal antibody (GPC-C epitope)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Glycoprotein G1 | polymer | 259 | 29010.4 | 3 | UniProt (P08669) Pfam (PF00798) | Lassa virus Josiah | |
| 2 | D (H) | Rabbit polyclonal Fv heavy chain | polymer | 125 | 10656.1 | 1 | Oryctolagus cuniculus | ||
| 3 | E (L) | Rabbit polyclonal Fv light chain | polymer | 110 | 9379.6 | 1 | Oryctolagus cuniculus | ||
| 4 | F, G, H (a, b, c) | Glycoprotein G2 | polymer | 406 | 44765.0 | 3 | UniProt (P08669) Pfam (PF00798) | Lassa virus Josiah | GP2 |
| 5 | I (D) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 1 | In PDB GlyTouCan (G32152BH) | |||
| 6 | BA, EA, FA, J, K... (Y, e, f, E, F...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 12 | In PDB GlyTouCan (G42666HT) | |||
| 7 | P, U, W, X (M, R, T, U) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 4 | In PDB GlyTouCan (G15407YE) | |||
| 8 | Q, R, V, Y (N, O, S, V) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 4 | In PDB GlyTouCan (G21290RB) | |||
| 9 | AA (X) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G42227JK) | |||
| 10 | CA (Z) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1073.0 | 1 | In PDB GlyTouCan (G56014GC) | |||
| 11 | DA (d) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 12 | GA, HA, IA, JA, KA... (A, B, C, a, b...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 9 | Chemie (NAG) |
Sequence modifications
A, B, C: 1 - 259 (UniProt: P08669)
a, b, c: 260 - 424 (UniProt: P08669)
| PDB | External Database | Details |
|---|---|---|
| Cys 207 | Arg 207 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Pro 329 | Glu 329 | conflict |
| Cys 360 | Gly 360 | conflict |
| Gly 425 | - | expression tag |
| Ser 426 | - | expression tag |
| Gly 427 | - | expression tag |
| Gly 428 | - | expression tag |
| Ser 429 | - | expression tag |
| Gly 430 | - | expression tag |
| Gly 431 | - | expression tag |
| Ser 432 | - | expression tag |
| Gly 433 | - | expression tag |
| Gly 434 | - | expression tag |
| Ser 435 | - | expression tag |
| Gly 436 | - | expression tag |
| Gly 437 | - | expression tag |
| Ser 438 | - | expression tag |
| Glu 439 | - | expression tag |
| Lys 440 | - | expression tag |
| Ala 441 | - | expression tag |
| Ala 442 | - | expression tag |
| Lys 443 | - | expression tag |
| Ala 444 | - | expression tag |
| Glu 445 | - | expression tag |
| Glu 446 | - | expression tag |
| Ala 447 | - | expression tag |
| Ala 448 | - | expression tag |
| Arg 449 | - | expression tag |
| Lys 450 | - | expression tag |
| Met 451 | - | expression tag |
| Glu 452 | - | expression tag |
| Glu 453 | - | expression tag |
| Leu 454 | - | expression tag |
| Phe 455 | - | expression tag |
| Lys 456 | - | expression tag |
| Lys 457 | - | expression tag |
| His 458 | - | expression tag |
| Lys 459 | - | expression tag |
| Ile 460 | - | expression tag |
| Val 461 | - | expression tag |
| Ala 462 | - | expression tag |
| Val 463 | - | expression tag |
| Leu 464 | - | expression tag |
| Arg 465 | - | expression tag |
| Ala 466 | - | expression tag |
| Asn 467 | - | expression tag |
| Ser 468 | - | expression tag |
| Val 469 | - | expression tag |
| Glu 470 | - | expression tag |
| Glu 471 | - | expression tag |
| Ala 472 | - | expression tag |
| Ile 473 | - | expression tag |
| Glu 474 | - | expression tag |
| Lys 475 | - | expression tag |
| Ala 476 | - | expression tag |
| Val 477 | - | expression tag |
| Ala 478 | - | expression tag |
| Val 479 | - | expression tag |
| Phe 480 | - | expression tag |
| Ala 481 | - | expression tag |
| Gly 482 | - | expression tag |
| Gly 483 | - | expression tag |
| Val 484 | - | expression tag |
| His 485 | - | expression tag |
| Leu 486 | - | expression tag |
| Ile 487 | - | expression tag |
| Glu 488 | - | expression tag |
| Ile 489 | - | expression tag |
| Thr 490 | - | expression tag |
| Phe 491 | - | expression tag |
| Thr 492 | - | expression tag |
| Val 493 | - | expression tag |
| Pro 494 | - | expression tag |
| Asp 495 | - | expression tag |
| Ala 496 | - | expression tag |
| Asp 497 | - | expression tag |
| Thr 498 | - | expression tag |
| Val 499 | - | expression tag |
| Ile 500 | - | expression tag |
| Lys 501 | - | expression tag |
| Ala 502 | - | expression tag |
| Leu 503 | - | expression tag |
| Ser 504 | - | expression tag |
| Val 505 | - | expression tag |
| Leu 506 | - | expression tag |
| Lys 507 | - | expression tag |
| Glu 508 | - | expression tag |
| Lys 509 | - | expression tag |
| Gly 510 | - | expression tag |
| Ala 511 | - | expression tag |
| Ile 512 | - | expression tag |
| Ile 513 | - | expression tag |
| Gly 514 | - | expression tag |
| Ala 515 | - | expression tag |
| Gly 516 | - | expression tag |
| Thr 517 | - | expression tag |
| Val 518 | - | expression tag |
| Thr 519 | - | expression tag |
| Ser 520 | - | expression tag |
| Val 521 | - | expression tag |
| Glu 522 | - | expression tag |
| Gln 523 | - | expression tag |
| Cys 524 | - | expression tag |
| Arg 525 | - | expression tag |
| Lys 526 | - | expression tag |
| Ala 527 | - | expression tag |
| Val 528 | - | expression tag |
| Glu 529 | - | expression tag |
| Ser 530 | - | expression tag |
| Gly 531 | - | expression tag |
| Ala 532 | - | expression tag |
| Glu 533 | - | expression tag |
| Phe 534 | - | expression tag |
| Ile 535 | - | expression tag |
| Val 536 | - | expression tag |
| Ser 537 | - | expression tag |
| Pro 538 | - | expression tag |
| His 539 | - | expression tag |
| Leu 540 | - | expression tag |
| Asp 541 | - | expression tag |
| Glu 542 | - | expression tag |
| Glu 543 | - | expression tag |
| Ile 544 | - | expression tag |
| Ser 545 | - | expression tag |
| Gln 546 | - | expression tag |
| Phe 547 | - | expression tag |
| Cys 548 | - | expression tag |
| Lys 549 | - | expression tag |
| Glu 550 | - | expression tag |
| Lys 551 | - | expression tag |
| Gly 552 | - | expression tag |
| Val 553 | - | expression tag |
| Phe 554 | - | expression tag |
| Tyr 555 | - | expression tag |
| Met 556 | - | expression tag |
| Pro 557 | - | expression tag |
| Gly 558 | - | expression tag |
| Val 559 | - | expression tag |
| Met 560 | - | expression tag |
| Thr 561 | - | expression tag |
| Pro 562 | - | expression tag |
| Thr 563 | - | expression tag |
| Glu 564 | - | expression tag |
| Leu 565 | - | expression tag |
| Val 566 | - | expression tag |
| Lys 567 | - | expression tag |
| Ala 568 | - | expression tag |
| Met 569 | - | expression tag |
| Lys 570 | - | expression tag |
| Leu 571 | - | expression tag |
| Gly 572 | - | expression tag |
| His 573 | - | expression tag |
| Asp 574 | - | expression tag |
| Ile 575 | - | expression tag |
| Leu 576 | - | expression tag |
| Lys 577 | - | expression tag |
| Leu 578 | - | expression tag |
| Phe 579 | - | expression tag |
| Pro 580 | - | expression tag |
| Gly 581 | - | expression tag |
| Glu 582 | - | expression tag |
| Val 583 | - | expression tag |
| Val 584 | - | expression tag |
| Gly 585 | - | expression tag |
| Pro 586 | - | expression tag |
| Glu 587 | - | expression tag |
| Phe 588 | - | expression tag |
| Val 589 | - | expression tag |
| Lys 590 | - | expression tag |
| Ala 591 | - | expression tag |
| Met 592 | - | expression tag |
| Lys 593 | - | expression tag |
| Gly 594 | - | expression tag |
| Pro 595 | - | expression tag |
| Phe 596 | - | expression tag |
| Pro 597 | - | expression tag |
| Asn 598 | - | expression tag |
| Val 599 | - | expression tag |
| Lys 600 | - | expression tag |
| Phe 601 | - | expression tag |
| Val 602 | - | expression tag |
| Pro 603 | - | expression tag |
| Thr 604 | - | expression tag |
| Gly 605 | - | expression tag |
| Gly 606 | - | expression tag |
| Val 607 | - | expression tag |
| Asp 608 | - | expression tag |
| Leu 609 | - | expression tag |
| Asp 610 | - | expression tag |
| Asn 611 | - | expression tag |
| Val 612 | - | expression tag |
| Cys 613 | - | expression tag |
| Glu 614 | - | expression tag |
| Trp 615 | - | expression tag |
| Phe 616 | - | expression tag |
| Asp 617 | - | expression tag |
| Ala 618 | - | expression tag |
| Gly 619 | - | expression tag |
| Val 620 | - | expression tag |
| Leu 621 | - | expression tag |
| Ala 622 | - | expression tag |
| Val 623 | - | expression tag |
| Gly 624 | - | expression tag |
| Val 625 | - | expression tag |
| Gly 626 | - | expression tag |
| Asp 627 | - | expression tag |
| Ala 628 | - | expression tag |
| Leu 629 | - | expression tag |
| Val 630 | - | expression tag |
| Glu 631 | - | expression tag |
| Gly 632 | - | expression tag |
| Asp 633 | - | expression tag |
| Pro 634 | - | expression tag |
| Asp 635 | - | expression tag |
| Glu 636 | - | expression tag |
| Val 637 | - | expression tag |
| Arg 638 | - | expression tag |
| Glu 639 | - | expression tag |
| Lys 640 | - | expression tag |
| Ala 641 | - | expression tag |
| Lys 642 | - | expression tag |
| Glu 643 | - | expression tag |
| Phe 644 | - | expression tag |
| Val 645 | - | expression tag |
| Glu 646 | - | expression tag |
| Lys 647 | - | expression tag |
| Ile 648 | - | expression tag |
| Arg 649 | - | expression tag |
| Gly 650 | - | expression tag |
| Cys 651 | - | expression tag |
| Thr 652 | - | expression tag |
| Glu 653 | - | expression tag |
| Gly 654 | - | expression tag |
| Ser 655 | - | expression tag |
| Leu 656 | - | expression tag |
| Glu 657 | - | expression tag |
| Trp 658 | - | expression tag |
| Ser 659 | - | expression tag |
| His 660 | - | expression tag |
| Pro 661 | - | expression tag |
| Gln 662 | - | expression tag |
| Phe 663 | - | expression tag |
| Glu 664 | - | expression tag |
| Lys 665 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 241361.9 | |
| Branched | Number of molecules | 24 |
| Total formula weight | 13186.3 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1990.9 | |
| All* | Total formula weight | 256539.0 |
