8VAM
Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA polymerase III subunit delta | polymer | 333 | 37688.4 | 1 | UniProt (P28630) Pfam (PF06144) Pfam (PF14840) | Escherichia coli | |
| 2 | B, C, D (B, C, D) | DNA polymerase III subunit tau | polymer | 376 | 41803.2 | 3 | UniProt (P06710) Pfam (PF13177) Pfam (PF22608) Pfam (PF12169) | Escherichia coli | DNA polymerase III subunit gamma |
| 3 | E (E) | DNA polymerase III subunit delta' | polymer | 337 | 37272.8 | 1 | UniProt (P28631) Pfam (PF13177) Pfam (PF21500) Pfam (PF09115) | Escherichia coli | |
| 4 | F, G (F, G) | Beta sliding clamp | polymer | 369 | 40922.8 | 2 | UniProt (P0A988) Pfam (PF02767) Pfam (PF02768) Pfam (PF00712) | Escherichia coli | |
| 5 | H, O, S, T (B, C, D, E) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 6 | I, L, P (B, C, D) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 3 | Chemie (ADP) | |||
| 7 | J, M, Q (B, C, D) | BERYLLIUM TRIFLUORIDE ION | non-polymer | 66.0 | 3 | Chemie (BEF) | |||
| 8 | K, N, R (B, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) |
Sequence modifications
B, C, D: 1 - 373 (UniProt: P06710)
E: 1 - 334 (UniProt: P28631)
F, G: 1 - 366 (UniProt: P0A988)
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 7 |
| Total formula weight | 282216.3 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 1814.2 | |
| All* | Total formula weight | 284030.5 |






