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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8V9J

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1a16S Ribosomal RNApolymer1528495373.71GenBank (118168627)Mycolicibacterium smegmatis MC2 155
2b30S Ribosomal Protein S2polymer27730145.21UniProt (A0QVB8)
Pfam (PF00318)
In PDB		Mycolicibacterium smegmatis MC2 155Small ribosomal subunit protein uS2
3c30S ribosomal protein S3polymer27530191.21UniProt (A0QSD7)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Mycolicibacterium smegmatis MC2 155
4d30S ribosomal protein S4polymer20123415.81UniProt (A0QSL7)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Mycolicibacterium smegmatis MC2 155
5e30S Ribosomal Protein S5polymer21421946.11UniProt (A0QSG6)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Mycolicibacterium smegmatis MC2 155Small ribosomal subunit protein uS5
6f30S ribosomal protein S6polymer9610991.61UniProt (A0A2U9Q0X2)
Pfam (PF01250)
In PDB		Mycolicibacterium smegmatis MC2 155
7g30S ribosomal protein S7polymer15617660.41UniProt (A0QS97)
Pfam (PF00177)
In PDB		Mycolicibacterium smegmatis MC2 155
8h30S Ribosomal Protein S8polymer13214492.61UniProt (A0QSG3)
Pfam (PF00410)
In PDB		Mycolicibacterium smegmatis MC2 155Small ribosomal subunit protein uS8
9i30S ribosomal protein S9polymer15016794.41UniProt (A0QSP9)
Pfam (PF00380)
In PDB		Mycolicibacterium smegmatis MC2 155
10j30S ribosomal protein S10polymer10111454.31UniProt (A0QSD0)
Pfam (PF00338)
In PDB		Mycolicibacterium smegmatis MC2 155
11k30S ribosomal protein S11polymer13814671.81UniProt (A0QSL6)
Pfam (PF00411)
In PDB		Mycolicibacterium smegmatis MC2 155
12l30S ribosomal protein S12polymer12413896.41UniProt (A0QS96)
Pfam (PF00164)
In PDB		Mycolicibacterium smegmatis MC2 155
13m30S ribosomal protein S13polymer12414249.61UniProt (A0QSL5)
Pfam (PF00416)
In PDB		Mycolicibacterium smegmatis MC2 155
14n30S Ribosomal Protein S14polymer616976.41UniProt (A0QSG2)
Pfam (PF00253)
In PDB		Mycolicibacterium smegmatis MC2 155
15o30S Ribosomal Protein S15polymer8910368.11UniProt (A0QVQ3)
Pfam (PF00312)
In PDB		Mycolicibacterium smegmatis MC2 155
16p30S ribosomal protein S16polymer15616795.21UniProt (A0QV37)
Pfam (PF00886)
In PDB		Mycolicibacterium smegmatis MC2 155
17q30S ribosomal protein S17polymer9811127.01UniProt (A0QSE0)
Pfam (PF00366)
In PDB		Mycolicibacterium smegmatis MC2 155
18r30S Ribosomal Protein S18polymer849524.21UniProt (A0R7F7)
Pfam (PF01084)
In PDB		Mycolicibacterium smegmatis MC2 155
19s30S ribosomal protein S19polymer9310800.61UniProt (A0QSD5)
Pfam (PF00203)
In PDB		Mycolicibacterium smegmatis MC2 155
20t30S ribosomal protein S20polymer869556.11UniProt (A0R102)
Pfam (PF01649)
In PDB		Mycolicibacterium smegmatis MC2 155
21u30S Ribosomal Protein S22polymer334164.31Mycolicibacterium smegmatis MC2 155
22vpoly-U mRNApolymer3873.51Mycolicibacterium smegmatis MC2 155
23ype/E deacylated phenylanaline-tRNApolymer7624531.71Mycolicibacterium smegmatis MC2 155
24zRibosome hibernation factor Balon (MSMEG_1130)polymer37541390.71UniProt (A0QRI6)
Pfam (PF18854)
In PDB		Mycolicibacterium smegmatis MC2 155
25A23S Ribosomal RNApolymer31641026283.41GenBank (118168627)Mycolicibacterium smegmatis MC2 155
26B5S Ribosomal RNApolymer11838061.81GenBank (118168627)Mycolicibacterium smegmatis MC2 155
27C50S ribosomal protein L2polymer27830425.91UniProt (A0QSD4)
Pfam (PF03947)
Pfam (PF00181)
In PDB		Mycolicibacterium smegmatis MC2 155
28D50S ribosomal protein L3polymer21723011.41UniProt (A0QSD1)
Pfam (PF00297)
In PDB		Mycolicibacterium smegmatis MC2 155
29E50S Ribosomal Protein L4polymer21522920.91UniProt (A0QSD2)
Pfam (PF00573)
In PDB		Mycolicibacterium smegmatis MC2 155
30F50S Ribosomal Protein L5polymer18721152.31UniProt (A0QSG1)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Mycolicibacterium smegmatis MC2 155
31G50S ribosomal protein L6polymer17919483.41UniProt (A0QSG4)
Pfam (PF00347)
In PDB		Mycolicibacterium smegmatis MC2 155
32H50S ribosomal protein L9polymer15115949.31UniProt (A0R7F6)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Mycolicibacterium smegmatis MC2 155
33I50S ribosomal protein L10polymer17518035.71UniProt (A0QS62)
Pfam (PF00466)
In PDB		Mycolicibacterium smegmatis MC2 155
34J50S ribosomal protein L11polymer14215023.41UniProt (A0QS45)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Mycolicibacterium smegmatis MC2 155
35K50S Ribosomal Protein L01polymer23525058.61UniProt (A0QS46)
Pfam (PF00687)
In PDB		Mycolicibacterium smegmatis MC2 155
36L50S Ribosomal Protein L13polymer14716146.71UniProt (A0QSP8)
Pfam (PF00572)
In PDB		Mycolicibacterium smegmatis MC2 155
37M50S ribosomal protein L14polymer12213400.61UniProt (A0QSF9)
Pfam (PF00238)
In PDB		Mycolicibacterium smegmatis MC2 155
38N50S ribosomal protein L15polymer14715602.21UniProt (A0QSG8)
Pfam (PF00828)
In PDB		Mycolicibacterium smegmatis MC2 155
39O50S Ribosomal Protein L16polymer13715627.11UniProt (A0QSD8)
Pfam (PF00252)
In PDB		Mycolicibacterium smegmatis MC2 155
40P50S ribosomal protein L17polymer19921892.21UniProt (A0QSL9)
Pfam (PF01196)
In PDB		Mycolicibacterium smegmatis MC2 155
41Q50S Ribosomal Protein L18polymer12713711.71UniProt (I7FGD9)
Pfam (PF00861)
In PDB		Mycolicibacterium smegmatis MC2 155
42R50S ribosomal protein L19polymer11312892.81UniProt (A0QV42)
Pfam (PF01245)
In PDB		Mycolicibacterium smegmatis MC2 155
43S50S Ribosomal Protein L20polymer12914494.71UniProt (A0QYU6)
Pfam (PF00453)
In PDB		Mycolicibacterium smegmatis MC2 155
44T50S Ribosomal Protein L21polymer10311055.91UniProt (A0R151)
Pfam (PF00829)
In PDB		Mycolicibacterium smegmatis MC2 155
45U50S Ribosomal Protein L22polymer15316353.61UniProt (A0QSD6)
Pfam (PF00237)
In PDB		Mycolicibacterium smegmatis MC2 155
46V50S Ribosomal Protein L23polymer10011047.81UniProt (A0QSD3)
Pfam (PF00276)
In PDB		Mycolicibacterium smegmatis MC2 155
47W50S ribosomal protein L24polymer10511228.91UniProt (A0QSG0)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Mycolicibacterium smegmatis MC2 155
48X50S ribosomal protein L25polymer21522571.11UniProt (A0R3D2)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Mycolicibacterium smegmatis MC2 155General stress protein CTC
49Y50S ribosomal protein L27polymer889249.61UniProt (A0R150)
Pfam (PF01016)
In PDB		Mycolicibacterium smegmatis MC2 155
50Z50S Ribosomal Protein L28polymer646891.01UniProt (I7FJ52)
Pfam (PF00830)
In PDB		Mycolicibacterium smegmatis MC2 155
51150S ribosomal protein L29polymer778790.91UniProt (A0QSD9)
Pfam (PF00831)
In PDB		Mycolicibacterium smegmatis MC2 155
52250S ribosomal protein L30polymer617022.11UniProt (A0QSG7)
Pfam (PF00327)
In PDB		Mycolicibacterium smegmatis MC2 155
53350S Ribosomal Protein L31polymer758312.51UniProt (A0R215)
Pfam (PF01197)
In PDB		Mycolicibacterium smegmatis MC2 155
54450S ribosomal protein L32polymer576467.71UniProt (A0R3I9)
Pfam (PF01783)
In PDB		Mycolicibacterium smegmatis MC2 155
55550S Ribosomal Protein L33polymer556468.51UniProt (A0QS39)
Pfam (PF00471)
In PDB		Mycolicibacterium smegmatis MC2 155
56650S ribosomal protein L34polymer475522.61UniProt (A0R7K0)
Pfam (PF00468)
In PDB		Mycolicibacterium smegmatis MC2 155
57750S ribosomal protein L35polymer647298.51UniProt (A0QYU7)
Pfam (PF01632)
In PDB		Mycolicibacterium smegmatis MC2 155
58850S ribosomal protein L36polymer374341.31UniProt (A0QSL4)
Pfam (PF00444)
In PDB		Mycolicibacterium smegmatis MC2 155
59950S Ribosomal Protein L37polymer242841.41UniProt (A0QTP4)
In PDB		Mycolicibacterium smegmatis MC2 155
60Z, 5ZINC IONnon-polymer65.42Chemie (ZN)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains59
Total formula weight2386028.6
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight2386159.4
*Water molecules are not included.

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PDB entries from 2024-07-24

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