8V4F
Model and map from local refinement of a CAB-A17 - Omicron Ba.1 spike complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B | CAB-A17 variable heavy-chain | polymer | 117 | 12926.3 | 1 | Homo sapiens | ||
2 | D | CAB-A17 variable light chain | polymer | 106 | 11395.6 | 1 | Homo sapiens | ||
3 | A | Spike protein S1 | polymer | 193 | 21968.8 | 1 | UniProt (P0DTC2) Pfam (PF09408) In PDB | Severe acute respiratory syndrome coronavirus 2 |
Sequence modifications
A: 334 - 526 (UniProt: P0DTC2)
PDB | External Database | Details |
---|---|---|
Asp 339 | Gly 339 | conflict |
Leu 371 | Ser 371 | conflict |
Pro 373 | Ser 373 | conflict |
Phe 375 | Ser 375 | conflict |
Asn 417 | Lys 417 | conflict |
Lys 440 | Asn 440 | conflict |
Ser 446 | Gly 446 | conflict |
Asn 477 | Ser 477 | conflict |
Lys 478 | Thr 478 | conflict |
Ala 484 | Glu 484 | conflict |
Arg 493 | Gln 493 | conflict |
Ser 496 | Gly 496 | conflict |
Arg 498 | Gln 498 | conflict |
Tyr 501 | Asn 501 | conflict |
His 505 | Tyr 505 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 46290.7 | |
All* | Total formula weight | 46290.7 |