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8V3M

CCP5 apo structure

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Cytosolic carboxypeptidase-like protein 5polymer52459170.71UniProt (Q8NDL9)
Pfam (PF18027)
Pfam (PF00246)
Homo sapiens (human)ATP/GTP-binding protein-like 5,Protein deglutamylase CCP5
2B, C
(A)
D-MALATEnon-polymer134.12Chemie (MLT)
3D, E
(A)
IMIDAZOLEnon-polymer69.12Chemie (IMD)
4F
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
5G
(A)
waterwater18.0256Chemie (HOH)
Sequence modifications
A: 2 - 338 (UniProt: Q8NDL9)
PDBExternal DatabaseDetails
Asn 1-expression tag
A: 425 - 605 (UniProt: Q8NDL9)
PDBExternal DatabaseDetails
Ser 339-linker
Gly 340-linker
Ser 341-linker
Gly 342-linker
Gly 343-linker
Ala 516Glu 516engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight59170.7
Non-Polymers*Number of molecules5
Total formula weight471.8
All*Total formula weight59642.4
*Water molecules are not included.

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PDB entries from 2025-07-16

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