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8V0B

Structure of TDP1 catalytic domain complexed with compound IB05

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Tyrosyl-DNA phosphodiesterase 1polymer46152126.32UniProt (Q9NUW8)
Pfam (PF06087)
Homo sapiens (human)Tyr-DNA phosphodiesterase 1
2C, L
(A, B)
8-{4-[(fluorosulfonyl)oxy]phenyl}-4-oxo-1,4-dihydroquinoline-3-carboxylic acidnon-polymer363.32Chemie (YCI)
3D, E, F, G, H...
(A, B)
1,2-ETHANEDIOLnon-polymer62.18Chemie (EDO)
4J, O
(A, B)
DIMETHYL SULFOXIDEnon-polymer78.12Chemie (DMS)
5K, P
(A, B)
DI(HYDROXYETHYL)ETHERnon-polymer106.12Chemie (PEG)
6Q, R
(A, B)
waterwater18.0676Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight104252.7
Non-Polymers*Number of molecules14
Total formula weight1591.7
All*Total formula weight105844.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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