8V03

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (1)	23S ribosomal RNA	polymer	2904	941627.4	1	GenBank (1126835764)	Escherichia coli
2	B (2)	16S ribosomal RNA	polymer	1540	499054.6	1	GenBank (1758835854)	Escherichia coli
3	C (3)	5S ribosomal RNA	polymer	120	38813.1	1	GenBank (1370526515)	Escherichia coli
4	D (4)	mRNA	polymer	18	5700.5	1		Escherichia coli
5	E (5)	tRNA ProL (GGG)	polymer	77	24876.8	1	GenBank (1847051788)	Escherichia coli
6	F (B)	50S ribosomal protein L2	polymer	273	29923.6	1	UniProt (P60422) Pfam (PF00181) Pfam (PF03947)	Escherichia coli	Large ribosomal subunit protein uL2
7	G (C)	50S ribosomal protein L3	polymer	209	22277.5	1	UniProt (P60438) Pfam (PF00297)	Escherichia coli	Large ribosomal subunit protein uL3
8	H (D)	50S ribosomal protein L4	polymer	201	22121.6	1	UniProt (A1AGK6) Pfam (PF00573) UniProt (by SIFTS) (P60723)	Escherichia coli
9	I (E)	50S ribosomal protein L5	polymer	179	20333.6	1	UniProt (A0A140N5A3) Pfam (PF00281) Pfam (PF00673) UniProt (by SIFTS) (P62399)	Escherichia coli
10	J (F)	50S ribosomal protein L6	polymer	177	18932.8	1	UniProt (C3SR17) Pfam (PF00347) UniProt (by SIFTS) (P0AG55)	Escherichia coli
11	K (G)	50S ribosomal protein L9	polymer	149	15789.0	1	UniProt (C3SFP2) Pfam (PF03948) Pfam (PF01281) UniProt (by SIFTS) (P0A7R1)	Escherichia coli
12	L (J)	Large ribosomal subunit protein uL13	polymer	142	16050.6	1	UniProt (P0AA12) Pfam (PF00572) UniProt (by SIFTS) (P0AA10)	Escherichia coli
13	M (K)	50S ribosomal protein L14	polymer	123	13565.1	1	UniProt (S1NW45) Pfam (PF00238) UniProt (by SIFTS) (P0ADY3)	Escherichia coli
14	N (L)	50S ribosomal protein L15	polymer	144	15008.5	1	UniProt (A0A037Y8L6) Pfam (PF00828) UniProt (by SIFTS) (P02413)	Escherichia coli
15	O (M)	50S ribosomal protein L16	polymer	136	15312.3	1	UniProt (P0ADY7) Pfam (PF00252)	Escherichia coli	Large ribosomal subunit protein uL16
16	P (N)	50S ribosomal protein L17	polymer	127	14393.7	1	UniProt (C3SR72) Pfam (PF01196) UniProt (by SIFTS) (P0AG44)	Escherichia coli
17	Q (O)	Large ribosomal subunit protein uL18	polymer	117	12794.7	1	UniProt (A0A828U007) Pfam (PF00861) UniProt (by SIFTS) (P0C018)	Escherichia coli
18	R (P)	Large ribosomal subunit protein bL19	polymer	115	13159.3	1	UniProt (P0A7K8) Pfam (PF01245) UniProt (by SIFTS) (P0A7K6)	Escherichia coli
19	S (Q)	50S ribosomal protein L20	polymer	118	13528.0	1	UniProt (B7MAS6) Pfam (PF00453) UniProt (by SIFTS) (P0A7L3)	Escherichia coli
20	T (R)	Large ribosomal subunit protein bL21	polymer	103	11586.4	1	UniProt (C3SSG2) Pfam (PF00829) UniProt (by SIFTS) (P0AG48)	Escherichia coli
21	U (S)	50S ribosomal protein L22	polymer	110	12253.4	1	UniProt (P61175) Pfam (PF00237)	Escherichia coli	Large ribosomal subunit protein uL22
22	V (T)	50S ribosomal protein L23	polymer	100	11222.2	1	UniProt (C3SQV2) Pfam (PF00276) UniProt (by SIFTS) (P0ADZ0)	Escherichia coli
23	W (U)	50S ribosomal protein L24	polymer	104	11339.3	1	UniProt (C3SQZ7) Pfam (PF00467) Pfam (PF17136) UniProt (by SIFTS) (P60624)	Escherichia coli
24	X (V)	Large ribosomal subunit protein bL25	polymer	94	10713.5	1	UniProt (P68919) Pfam (PF01386)	Escherichia coli
25	Y (W)	Large ribosomal subunit protein bL27	polymer	84	9015.3	1	UniProt (C3SSG7) Pfam (PF01016) UniProt (by SIFTS) (P0A7L8)	Escherichia coli
26	Z (X)	50S ribosomal protein L28	polymer	78	9027.6	1	UniProt (A0A1X3JA73) Pfam (PF00830) UniProt (by SIFTS) (P0A7M2)	Escherichia coli
27	AA (Y)	Large ribosomal subunit protein uL29	polymer	63	7286.5	1	UniProt (C3SQY2) Pfam (PF00831) UniProt (by SIFTS) (P0A7M6)	Escherichia coli
28	BA (Z)	50S ribosomal protein L30	polymer	59	6554.8	1	UniProt (C3SR32) Pfam (PF00327) UniProt (by SIFTS) (P0AG51)	Escherichia coli
29	CA (b)	50S ribosomal protein L32	polymer	57	6463.4	1	UniProt (C3TE02) Pfam (PF01783) UniProt (by SIFTS) (P0A7N4)	Escherichia coli
30	DA (c)	50S ribosomal protein L33	polymer	55	6388.6	1	UniProt (C3SME7) Pfam (PF00471) UniProt (by SIFTS) (P0A7N9)	Escherichia coli
31	EA (d)	50S ribosomal protein L34	polymer	46	5397.5	1	UniProt (B7MGC4) Pfam (PF00468) UniProt (by SIFTS) (P0A7P5)	Escherichia coli
32	FA (e)	50S ribosomal protein L35	polymer	65	7313.0	1	UniProt (P0A7Q1) Pfam (PF01632)	Escherichia coli	Large ribosomal subunit protein bL35,Ribosomal protein A
33	GA (f)	50S ribosomal protein L36	polymer	38	4377.4	1	UniProt (A0A0E2L017) Pfam (PF00444) UniProt (by SIFTS) (P0A7Q6)	Escherichia coli
34	HA (g)	30S ribosomal protein S2	polymer	241	26781.7	1	UniProt (C3TPN2) Pfam (PF00318) UniProt (by SIFTS) (P0A7V0)	Escherichia coli
35	IA (h)	Small ribosomal subunit protein uS3	polymer	206	23078.8	1	UniProt (P0A7V5) Pfam (PF07650) Pfam (PF00189) UniProt (by SIFTS) (P0A7V3)	Escherichia coli	30S ribosomal protein S3
36	JA (i)	30S ribosomal protein S4	polymer	206	23514.2	1	UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479)	Escherichia coli
37	KA (j)	30S ribosomal protein S5	polymer	167	17629.4	1	UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719)	Escherichia coli
38	LA (k)	30S ribosomal protein S6	polymer	135	15727.5	1	UniProt (P02358) Pfam (PF01250)	Escherichia coli	Small ribosomal subunit protein bS6
39	MA (l)	30S ribosomal protein S7	polymer	179	20055.2	1	UniProt (P02359) Pfam (PF00177)	Escherichia coli	Small ribosomal subunit protein uS7
40	NA (m)	Small ribosomal subunit protein uS8	polymer	130	14146.6	1	UniProt (C3SR12) Pfam (PF00410) UniProt (by SIFTS) (P0A7W7)	Escherichia coli
41	OA (n)	Small ribosomal subunit protein uS9	polymer	130	14886.3	1	UniProt (C3SRY2) Pfam (PF00380) UniProt (by SIFTS) (P0A7X3)	Escherichia coli
42	PA (o)	Small ribosomal subunit protein uS10	polymer	103	11755.6	1	UniProt (C3SQT7) Pfam (PF00338) UniProt (by SIFTS) (P0A7R5)	Escherichia coli
43	QA (p)	30S ribosomal protein S11	polymer	129	13871.0	1	UniProt (B7MCR3) Pfam (PF00411) UniProt (by SIFTS) (P0A7R9)	Escherichia coli
44	RA (q)	Small ribosomal subunit protein uS12	polymer	124	13814.2	1	UniProt (C3SQR7) Pfam (PF00164) UniProt (by SIFTS) (P0A7S3)	Escherichia coli
45	SA (r)	30S ribosomal protein S13	polymer	118	13128.5	1	UniProt (A0A7U9IV78) Pfam (PF00416) UniProt (by SIFTS) (P0A7S9)	Escherichia coli
46	TA (s)	Small ribosomal subunit protein uS14	polymer	102	11677.6	1	UniProt (C3SR07) Pfam (PF00253) UniProt (by SIFTS) (P0AG59)	Escherichia coli
47	UA (t)	Small ribosomal subunit protein uS15	polymer	89	10290.8	1	UniProt (C3SSQ7) Pfam (PF00312) UniProt (by SIFTS) (P0ADZ4)	Escherichia coli
48	VA (u)	30S ribosomal protein S16	polymer	82	9207.6	1	UniProt (C3SYP2) Pfam (PF00886) UniProt (by SIFTS) (P0A7T3)	Escherichia coli
49	WA (v)	Small ribosomal subunit protein uS17	polymer	84	9724.5	1	UniProt (C3SQY7) Pfam (PF00366) UniProt (by SIFTS) (P0AG63)	Escherichia coli
50	XA (w)	30S ribosomal protein S18	polymer	75	9005.5	1	UniProt (A0A0E2KXL3) Pfam (PF01084) UniProt (by SIFTS) (P0A7T7)	Escherichia coli
51	YA (x)	Small ribosomal subunit protein uS19	polymer	92	10455.4	1	UniProt (C3SQW2) Pfam (PF00203) UniProt (by SIFTS) (P0A7U3)	Escherichia coli
52	ZA (y)	30S ribosomal protein S20	polymer	87	9708.5	1	UniProt (C3TRH7) Pfam (PF01649) UniProt (by SIFTS) (P0A7U7)	Escherichia coli
53	AB (z)	30S ribosomal protein S21	polymer	71	8524.0	1	UniProt (A0A0E2L2J1) Pfam (PF01165) UniProt (by SIFTS) (P68679)	Escherichia coli
54	AC, AD, AE, AF, AG... (1, 2, 3, B, D...)	MAGNESIUM ION	non-polymer		24.3	281	Chemie (MG)
55	AM, AN, BM, BN, CM... (5, g, B, h, C...)	water	water		18.0	992	Chemie (HOH)

Sequence modifications

1: 1 - 2904 (GenBank: 1126835764)

PDB	External Database	Details
C 747	U 2724742	conflict
G 1847	A 2723642	conflict

3: 1 - 120 (GenBank: 1370526515)

PDB	External Database	Details
A 120	U 2744652	conflict

s: 0 - 101 (UniProt: C3SR07)

PDB	External Database	Details
Ala 36	-	insertion

Contents of the asymmetric unit

Polymers	Number of chains	53
	Total formula weight	2159184.1
Non-Polymers*	Number of molecules	281
	Total formula weight	6829.7
All*	Total formula weight	2166013.8

*Water molecules are not included.