8UXQ
Structure of Heterochromatin Protein 1 (HP1) alpha in complex with an H2A.Z nucleosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, C) | Chromobox protein homolog 5 | polymer | 195 | 22651.4 | 2 | UniProt (P45973) Pfam (PF00385) Pfam (PF01393) | Homo sapiens (human) | Antigen p25,Heterochromatin protein 1 homolog alpha,HP1 alpha |
| 2 | C, G (E, K) | Histone H3.2 | polymer | 135 | 15303.9 | 2 | UniProt (P84233) Pfam (PF00125) | Xenopus laevis (African clawed frog) | Histone H3 |
| 3 | D, H (F, L) | Histone H4 | polymer | 102 | 11263.2 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
| 4 | E, I (G, M) | Histone H2A.Z | polymer | 127 | 13450.6 | 2 | UniProt (P0C0S6) Pfam (PF00125) Pfam (PF16211) | Mus musculus (house mouse) | H2A/z |
| 5 | F, J (H, N) | Histone H2B 1.1 | polymer | 125 | 13848.1 | 2 | UniProt (P02281) Pfam (PF00125) | Xenopus laevis (African clawed frog) | H2B1.1 |
| 6 | K (I) | DNA Widom601 (208bp) strand1 | polymer | 208 | 64456.0 | 1 | synthetic construct | ||
| 7 | L (J) | DNA Widom601 (208bp) strand2 | polymer | 208 | 63988.7 | 1 | synthetic construct |
Sequence modifications
A, C: -19 - 170 (UniProt: P45973)
E, K: 289 - 423 (UniProt: P84233)
H, N: 587 - 711 (UniProt: P02281)
| PDB | External Database | Details |
|---|---|---|
| Gly -24 | - | expression tag |
| Ser -23 | - | expression tag |
| Pro -22 | - | expression tag |
| Glu -21 | - | expression tag |
| Phe -20 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 390 | Gly 103 | variant |
| PDB | External Database | Details |
|---|---|---|
| Thr 618 | Ser 33 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 281479.3 | |
| All* | Total formula weight | 281479.3 |






