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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8UTI

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)		25S rRNApolymer33941096803.41GenBank (2313943860)Saccharomyces cerevisiae (baker's yeast)
2B
(B)		5S rRNApolymer12138951.11GenBank (1039024045)Saccharomyces cerevisiae (baker's yeast)
3C
(C)		5.8S rRNApolymer15850682.91GenBank (1267176496)Saccharomyces cerevisiae (baker's yeast)
4D
(D)		Messenger RNA (5'-R(P*AP*AP*UP*AP*AP*UP*GP*AP*AP*AP*A)-3')polymer103217.01Saccharomyces cerevisiae (baker's yeast)
5E
(m)		A site tRNApolymer7624378.41Saccharomyces cerevisiae (baker's yeast)
6F
(n)		P site initiator tRNApolymer7524238.51GenBank (176433)Saccharomyces cerevisiae (baker's yeast)
7G
(z)		Cytoplasmic 60S subunit biogenesis factor REH1 (N-terminal 3xFLAG tag)polymer58867173.61UniProt (A0A6A5PRT8)
Pfam (PF12756)
UniProt (by SIFTS) (Q06709)		Saccharomyces cerevisiae (baker's yeast)
8H
(E)		18S rRNApolymer1800579761.91GenBank (1262303)Saccharomyces cerevisiae (baker's yeast)
9I
(SP)		40S ribosomal protein S0-Apolymer20622811.11UniProt (P32905)
Pfam (PF00318)		Saccharomyces cerevisiae (baker's yeast)Nucleic acid-binding protein NAB1A,Small ribosomal subunit protein uS2-A
10J
(SQ)		40S ribosomal protein S1-Apolymer23226314.71UniProt (A0A6A5PRY4)
Pfam (PF01015)
UniProt (by SIFTS) (P33442)		Saccharomyces cerevisiae (baker's yeast)
11K
(SE)		40S ribosomal protein S15polymer11713265.61UniProt (A0A6A5Q6F2)
Pfam (PF00203)
UniProt (by SIFTS) (Q01855)		Saccharomyces cerevisiae (baker's yeast)
12L
(SR)		40S ribosomal protein S2polymer21623084.81UniProt (A0A6A5PWF7)
Pfam (PF00333)
Pfam (PF03719)
UniProt (by SIFTS) (P25443)		Saccharomyces cerevisiae (baker's yeast)
13M
(SA)		40S ribosomal protein S3polymer22224631.71UniProt (A0A6A5Q3Q1)
Pfam (PF07650)
Pfam (PF00189)
UniProt (by SIFTS) (P05750)		Saccharomyces cerevisiae (baker's yeast)
14N
(SS)		40S ribosomal protein S4-Apolymer25829167.91UniProt (P0CX35)
Pfam (PF08071)
Pfam (PF01479)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)		Saccharomyces cerevisiae (baker's yeast)
15O
(SB)		40S ribosomal protein S5polymer20622908.31UniProt (P26783)
Pfam (PF00177)		Saccharomyces cerevisiae (baker's yeast)RP14,S2,Small ribosomal subunit protein uS7,YS8
16P
(ST)		40S ribosomal protein S6-Apolymer22826181.41UniProt (P0CX37)
Pfam (PF01092)		Saccharomyces cerevisiae (baker's yeast)
17Q
(SU)		40S ribosomal protein S7-Apolymer18421000.51UniProt (P26786)
Pfam (PF01251)		Saccharomyces cerevisiae (baker's yeast)RP30,RP40,Small ribosomal subunit protein eS7-A
18R
(SV)		40S ribosomal protein S8-Apolymer19822277.41UniProt (A0A6A5Q1H1)
Pfam (PF01201)
UniProt (by SIFTS) (P0CX39)		Saccharomyces cerevisiae (baker's yeast)
19S
(SW)		40S ribosomal protein S9-Apolymer18421081.51UniProt (O13516)
Pfam (PF00163)
Pfam (PF01479)		Saccharomyces cerevisiae (baker's yeast)
20T
(SC)		40S ribosomal protein S10-Apolymer9211042.61UniProt (Q08745)
Pfam (PF03501)		Saccharomyces cerevisiae (baker's yeast)
21U
(SX)		40S ribosomal protein S11-Apolymer14216272.11UniProt (P0CX47)
Pfam (PF16205)
Pfam (PF00366)		Saccharomyces cerevisiae (baker's yeast)
22V
(SD)		40S ribosomal protein S12polymer12113028.01UniProt (P48589)
Pfam (PF01248)		Saccharomyces cerevisiae (baker's yeast)Small ribosomal subunit protein eS12
23W
(SY)		40S ribosomal protein S13polymer15016928.71UniProt (P05756)
Pfam (PF08069)
Pfam (PF00312)		Saccharomyces cerevisiae (baker's yeast)S27a,Small ribosomal subunit protein uS15,YS15
24X
(SZ)		40S ribosomal protein S14-Bpolymer12713446.41UniProt (P06367)
Pfam (PF00411)		Saccharomyces cerevisiae (baker's yeast)RP59A,Small ribosomal subunit protein uS11-A
25Y
(SF)		40S ribosomal protein S16-Apolymer14115659.21UniProt (P0CX51)
Pfam (PF00380)		Saccharomyces cerevisiae (baker's yeast)RP61R,Small ribosomal subunit protein uS9-A
26Z
(SG)		40S ribosomal protein S17-Bpolymer12514268.51UniProt (P02407)
Pfam (PF00833)		Saccharomyces cerevisiae (baker's yeast)
27AA
(SH)		40S ribosomal protein S18-Apolymer14516940.41UniProt (P0CX55)
Pfam (PF00416)		Saccharomyces cerevisiae (baker's yeast)Small ribosomal subunit protein uS13-A
28BA
(SI)		40S ribosomal protein S19-Apolymer14315810.91UniProt (P07280)
Pfam (PF01090)		Saccharomyces cerevisiae (baker's yeast)
29CA
(SJ)		40S ribosomal protein S20polymer10011363.31UniProt (A0A6A5PVE9)
Pfam (PF00338)
UniProt (by SIFTS) (P38701)		Saccharomyces cerevisiae (baker's yeast)
30DA
(Sa)		40S ribosomal protein S21-Apolymer879758.81UniProt (P0C0V8)
Pfam (PF01249)		Saccharomyces cerevisiae (baker's yeast)S26,Small ribosomal subunit protein eS21-A,YS25
31EA
(Sb)		40S ribosomal protein S22-Apolymer12914518.91UniProt (P0C0W1)
Pfam (PF00410)		Saccharomyces cerevisiae (baker's yeast)RP50,S24,Small ribosomal subunit protein uS8-A,YP58,YS22
32FA
(Sc)		40S ribosomal protein S23-Apolymer14415942.71UniProt (P0CX29)
Pfam (PF00164)		Saccharomyces cerevisiae (baker's yeast)RP37,S28,Small ribosomal subunit protein uS12-A,YS14
33GA
(Sd)		40S ribosomal protein S24-Apolymer13415231.61UniProt (P0CX31)
Pfam (PF01282)		Saccharomyces cerevisiae (baker's yeast)RP50,Small ribosomal subunit protein eS24-A
34HA
(Se)		40S ribosomal protein S26-Bpolymer9711023.01UniProt (P39938)
Pfam (PF01283)		Saccharomyces cerevisiae (baker's yeast)Small ribosomal subunit protein eS26-A
35IA
(Sf)		40S ribosomal protein S27-Apolymer818762.21UniProt (P35997)
Pfam (PF01667)		Saccharomyces cerevisiae (baker's yeast)RP61,Small ribosomal subunit protein eS27-A,YS20
36JA
(SM)		40S ribosomal protein S29-Apolymer536335.31UniProt (P41057)
Pfam (PF00253)		Saccharomyces cerevisiae (baker's yeast)S36,Small ribosomal subunit protein uS14-A,YS29
37KA
(Sg)		40S ribosomal protein S30-Apolymer576479.71UniProt (P0CX33)
Pfam (PF04758)		Saccharomyces cerevisiae (baker's yeast)
38LA
(SN)		40S ribosomal protein S31polymer738329.91UniProt (A0A6A5PU37)
Pfam (PF01599)
UniProt (by SIFTS) (P05759)		Saccharomyces cerevisiae (baker's yeast)
39MA
(SO)		40S ribosomal protein ASC1polymer31234151.51UniProt (P38011)
Pfam (PF00400)		Saccharomyces cerevisiae (baker's yeast)Receptor for activated C kinase,Receptor of activated protein kinase C 1,RACK1,Small ribosomal subunit protein RACK1
40NA
(SL)		40S ribosomal protein S28-Apolymer637116.31UniProt (Q3E7X9)
Pfam (PF01200)		Saccharomyces cerevisiae (baker's yeast)S33,Small ribosomal subunit protein eS28-A,YS27
41OA
(AA)		40S ribosomal protein S25-Apolymer10812067.31UniProt (A0A6A5PZ18)
Pfam (PF03297)
UniProt (by SIFTS) (Q3E792)		Saccharomyces cerevisiae (baker's yeast)
42PA
(LD)		60S ribosomal protein L2-Apolymer25127089.21UniProt (P0CX45)
Pfam (PF00181)
Pfam (PF03947)		Saccharomyces cerevisiae (baker's yeast)
43QA
(LE)		60S ribosomal protein L3polymer38643719.61UniProt (A0A6A5Q627)
Pfam (PF00297)
UniProt (by SIFTS) (P14126)		Saccharomyces cerevisiae (baker's yeast)
44RA
(LF)		60S ribosomal protein L4-Apolymer36139027.91UniProt (P10664)
Pfam (PF00573)
Pfam (PF14374)		Saccharomyces cerevisiae (baker's yeast)L2,Large ribosomal subunit protein uL4-A,RP2,YL2
45SA
(LG)		60S ribosomal protein L5polymer29433415.41UniProt (A0A6A5Q0W8)
Pfam (PF17144)
Pfam (PF14204)
UniProt (by SIFTS) (P26321)		Saccharomyces cerevisiae (baker's yeast)
46TA
(LH)		60S ribosomal protein L6-Bpolymer17519908.41UniProt (P05739)
Pfam (PF01159)
UniProt (by SIFTS) (Q02326)		Saccharomyces cerevisiae (baker's yeast)
47UA
(LI)		60S ribosomal protein L7-Apolymer22225240.41UniProt (P05737)
Pfam (PF08079)
Pfam (PF00327)		Saccharomyces cerevisiae (baker's yeast)L6,Large ribosomal subunit protein uL30-A,RP11,YL8
48VA
(LJ)		60S ribosomal protein L8-Apolymer23325815.01UniProt (A0A8H4C0K3)
Pfam (PF01248)
UniProt (by SIFTS) (P17076)		Saccharomyces cerevisiae (baker's yeast)
49WA
(LK)		60S ribosomal protein L9-Apolymer19121605.11UniProt (P05738)
Pfam (PF00347)		Saccharomyces cerevisiae (baker's yeast)L8,Large ribosomal subunit protein uL6-A,RP24,YL11
50XA
(LL)		60S ribosomal protein L10polymer21825080.11UniProt (A0A6A5PUZ5)
Pfam (PF00252)
UniProt (by SIFTS) (P41805)		Saccharomyces cerevisiae (baker's yeast)
51YA
(LM)		60S ribosomal protein L11-Bpolymer16919266.11UniProt (P0C0W9)
Pfam (PF00281)
Pfam (PF00673)		Saccharomyces cerevisiae (baker's yeast)L16,Large ribosomal subunit protein uL5-A,RP39,YL22
52ZA
(LN)		60S ribosomal protein L13-Apolymer19321885.21UniProt (Q12690)
Pfam (PF01294)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL13-A
53AB
(LO)		60S ribosomal protein L14-Apolymer13614976.81UniProt (P36105)
Pfam (PF00467)
Pfam (PF01929)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL14-A
54BB
(LP)		60S ribosomal protein L15-Apolymer20324351.21UniProt (P05748)
Pfam (PF00827)		Saccharomyces cerevisiae (baker's yeast)L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
55CB
(LQ)		60S ribosomal protein L16-Apolymer19722029.01UniProt (P26784)
Pfam (PF00572)		Saccharomyces cerevisiae (baker's yeast)L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15
56DB
(LR)		60S ribosomal protein L17-Apolymer18320458.31UniProt (P05740)
Pfam (PF00237)		Saccharomyces cerevisiae (baker's yeast)
57EB
(LS)		60S ribosomal protein L18-Apolymer18520478.11UniProt (P0CX49)
Pfam (PF17135)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL18-A,RP28
58FB
(LT)		60S ribosomal protein L19-Apolymer18821631.11UniProt (P0CX82)
Pfam (PF01280)
Pfam (PF25476)		Saccharomyces cerevisiae (baker's yeast)L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14
59GB
(LU)		60S ribosomal protein L20-Apolymer17120347.71UniProt (P0CX23)
Pfam (PF01775)		Saccharomyces cerevisiae (baker's yeast)
60HB
(LV)		60S ribosomal protein L21-Apolymer15918148.11UniProt (Q02753)
Pfam (PF01157)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL21-A
61IB
(LW)		60S ribosomal protein L22-Apolymer10011263.91UniProt (P05749)
Pfam (PF01776)		Saccharomyces cerevisiae (baker's yeast)L1c,Large ribosomal subunit protein eL22-A,RP4,YL31
62JB
(LX)		60S ribosomal protein L23-Apolymer13614362.81UniProt (P0CX41)
Pfam (PF00238)		Saccharomyces cerevisiae (baker's yeast)L17a,Large ribosomal subunit protein uL14-A,YL32
63KB
(LY)		60S ribosomal protein L24-Apolymer657614.91UniProt (A0A6A5PY83)
Pfam (PF01246)
UniProt (by SIFTS) (P04449)		Saccharomyces cerevisiae (baker's yeast)
64LB
(LZ)		60S ribosomal protein L25polymer12113771.21UniProt (P04456)
Pfam (PF03939)
Pfam (PF00276)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL23,RP16L,YL25,YP42'
65MB
(La)		60S ribosomal protein L26-Apolymer12514005.51UniProt (P05743)
Pfam (PF16906)
Pfam (PF00467)		Saccharomyces cerevisiae (baker's yeast)
66NB
(Lb)		60S ribosomal protein L27-Apolymer13515437.21UniProt (P0C2H6)
Pfam (PF01777)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL27-A
67OB
(Lc)		60S ribosomal protein L28polymer14816630.51UniProt (P02406)
Pfam (PF00828)		Saccharomyces cerevisiae (baker's yeast)L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24
68PB
(Ld)		60S ribosomal protein L29polymer586560.71UniProt (P05747)
Pfam (PF01779)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL29,YL43
69QB
(Le)		60S ribosomal protein L30polymer9610487.31UniProt (P14120)
Pfam (PF01248)		Saccharomyces cerevisiae (baker's yeast)
70RB
(Lf)		60S ribosomal protein L31-Apolymer10912649.81UniProt (P0C2H8)
Pfam (PF01198)		Saccharomyces cerevisiae (baker's yeast)L34,Large ribosomal subunit protein eL31-A,YL28
71SB
(Lg)		60S ribosomal protein L32polymer12714478.11UniProt (P38061)
Pfam (PF01655)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL32
72TB
(Lh)		60S ribosomal protein L33-Apolymer10612045.91UniProt (P05744)
Pfam (PF01247)		Saccharomyces cerevisiae (baker's yeast)L37,Large ribosomal subunit protein eL33-A,RP47,YL37
73UB
(Li)		60S ribosomal protein L34-Apolymer11212608.81UniProt (P87262)
Pfam (PF01199)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL34-A
74VB
(Lj)		60S ribosomal protein L35-Apolymer11913811.41UniProt (P0CX84)
Pfam (PF00831)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL29-A
75WB
(Lk)		60S ribosomal protein L36-Apolymer9911020.11UniProt (P05745)
Pfam (PF01158)		Saccharomyces cerevisiae (baker's yeast)L39,Large ribosomal subunit protein eL36-A,YL39
76XB
(Ll)		60S ribosomal protein L37-Apolymer819229.61UniProt (P49166)
Pfam (PF01907)		Saccharomyces cerevisiae (baker's yeast)
77YB
(Lm)		60S ribosomal protein L38polymer778714.41UniProt (P49167)
Pfam (PF01781)		Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL38
78ZB
(Ln)		60S ribosomal protein L39polymer506227.41UniProt (P04650)
Pfam (PF00832)		Saccharomyces cerevisiae (baker's yeast)L46,Large ribosomal subunit protein eL39,YL40
79AC
(Lo)		60S ribosomal protein L40-Apolymer526032.31UniProt (P0CH08)
Pfam (PF01020)		Saccharomyces cerevisiae (baker's yeast)CEP52,Large ribosomal subunit protein eL40-A
80BC
(Lp)		60S ribosomal protein L41-Apolymer253354.21UniProt (P0CX86)
Pfam (PF05162)		Saccharomyces cerevisiae (baker's yeast)L47,Large ribosomal subunit protein eL41-A,YL41
81CC
(Lq)		60S ribosomal protein L42-Apolymer10311840.21UniProt (P0CX27)
Pfam (PF00935)		Saccharomyces cerevisiae (baker's yeast)
82DC
(Lr)		60S ribosomal protein L43-Apolymer919981.81UniProt (P0CX25)
Pfam (PF01780)		Saccharomyces cerevisiae (baker's yeast)L37a,Large ribosomal subunit protein eL43-A,YL35
83EC
(A)		4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dionenon-polymer281.31Chemie (3HE)
Sequence modifications
A: 3 - 3396 (GenBank: 2313943860)
PDBExternal DatabaseDetails
U 493G 460458conflict
z: -155 - 1 (PDB: 8UTI)
z: 2 - 432 (UniProt: A0A6A5PRT8)
SN: 80 - 152 (UniProt: A0A6A5PU37)
PDBExternal DatabaseDetails
Ala 97Lys 97conflict
LH: 2 - 176 (UniProt: P05739)
PDBExternal DatabaseDetails
Lys 120Asn 120conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains82
Total formula weight3139009.8
Non-Polymers*Number of molecules1
Total formula weight281.3
All*Total formula weight3139291.1
*Water molecules are not included.

247536

PDB entries from 2026-01-14

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