8URQ
Spo11 core complex with gapped DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (F) | Meiotic recombination protein REC104 | polymer | 182 | 20763.1 | 1 | UniProt (P33323) Pfam (PF17378) | Saccharomyces cerevisiae S288C | |
| 2 | B (B) | Meiotic recombination protein REC102 | polymer | 264 | 30263.7 | 1 | UniProt (Q02721) Pfam (PF21736) | Saccharomyces cerevisiae S288C | |
| 3 | C (A) | Meiosis-specific protein SPO11 | polymer | 435 | 50020.1 | 1 | UniProt (P23179) Pfam (PF04406) Pfam (PF21180) | Saccharomyces cerevisiae S288C | |
| 4 | D (C) | Antiviral protein SKI8 | polymer | 397 | 44313.6 | 1 | UniProt (Q02793) Pfam (PF00400) | Saccharomyces cerevisiae S288C | |
| 5 | E (D) | gapped DNA | polymer | 71 | 21943.1 | 1 | Saccharomyces cerevisiae S288C | ||
| 6 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
A: 1 - 398 (UniProt: P23179)
C: 1 - 397 (UniProt: Q02793)
| PDB | External Database | Details |
|---|---|---|
| Asn 81 | Ser 81 | conflict |
| Ser 99 | Cys 99 | conflict |
| Ser 204 | Pro 204 | conflict |
| Asn 278 | Lys 278 | conflict |
| Val 372 | Ile 372 | conflict |
| Gly 393 | Arg 393 | conflict |
| Lys 396 | Glu 396 | conflict |
| Ser 399 | - | expression tag |
| Arg 400 | - | expression tag |
| His 401 | - | expression tag |
| His 402 | - | expression tag |
| His 403 | - | expression tag |
| His 404 | - | expression tag |
| His 405 | - | expression tag |
| His 406 | - | expression tag |
| His 407 | - | expression tag |
| His 408 | - | expression tag |
| His 409 | - | expression tag |
| His 410 | - | expression tag |
| Gly 411 | - | expression tag |
| Asp 412 | - | expression tag |
| Tyr 413 | - | expression tag |
| Lys 414 | - | expression tag |
| Asp 415 | - | expression tag |
| Asp 416 | - | expression tag |
| Asp 417 | - | expression tag |
| Asp 418 | - | expression tag |
| Lys 419 | - | expression tag |
| Asp 420 | - | expression tag |
| Tyr 421 | - | expression tag |
| Lys 422 | - | expression tag |
| Asp 423 | - | expression tag |
| Asp 424 | - | expression tag |
| Asp 425 | - | expression tag |
| Asp 426 | - | expression tag |
| Lys 427 | - | expression tag |
| Asp 428 | - | expression tag |
| Tyr 429 | - | expression tag |
| Lys 430 | - | expression tag |
| Asp 431 | - | expression tag |
| Asp 432 | - | expression tag |
| Asp 433 | - | expression tag |
| Asp 434 | - | expression tag |
| Lys 435 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Thr 73 | Ala 73 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 167303.6 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 24.3 | |
| All* | Total formula weight | 167327.9 |
