8URM
E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | 13S ribosomal RNA | polymer | 2904 | 941804.6 | 1 | GenBank (2577360273) | Escherichia coli | |
| 2 | B (2) | 16S ribosomal RNA | polymer | 1540 | 499239.0 | 1 | GenBank (1275521620) | Escherichia coli | |
| 3 | C (3) | 5S ribosomal RNA | polymer | 120 | 38790.1 | 1 | GenBank (1273279017) | Escherichia coli | |
| 4 | D (4) | mRNA | polymer | 18 | 5700.5 | 1 | Escherichia coli | ||
| 5 | E (5) | tRNA ProL | polymer | 77 | 24876.8 | 1 | GenBank (1847051788) | Escherichia coli | |
| 6 | F (6) | tRNA Val | polymer | 76 | 24617.8 | 1 | GenBank (1847302804) | Escherichia coli | |
| 7 | G (B) | 50S ribosomal protein L2 | polymer | 273 | 29923.6 | 1 | UniProt (P60422) | Escherichia coli | Large ribosomal subunit protein uL2 |
| 8 | H (C) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) | Escherichia coli | Large ribosomal subunit protein uL3 |
| 9 | I (D) | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (A1AGK6) | Escherichia coli | |
| 10 | J (E) | 50S ribosomal protein L5 | polymer | 179 | 20333.6 | 1 | UniProt (A0A140N5A3) | Escherichia coli | |
| 11 | K (F) | 50S ribosomal protein L6 | polymer | 177 | 18932.8 | 1 | UniProt (C3SR17) | Escherichia coli | |
| 12 | L (G) | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (C3SFP2) | Escherichia coli | |
| 13 | M (J) | Large ribosomal subunit protein uL13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA12) | Escherichia coli | |
| 14 | N (K) | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (S1NW45) | Escherichia coli | |
| 15 | O (L) | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (A0A037Y8L6) | Escherichia coli | |
| 16 | P (M) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) | Escherichia coli | Large ribosomal subunit protein uL16 |
| 17 | Q (N) | 50S ribosomal protein L17 | polymer | 127 | 14393.7 | 1 | UniProt (C3SR72) | Escherichia coli | |
| 18 | R (O) | Large ribosomal subunit protein uL18 | polymer | 117 | 12794.7 | 1 | UniProt (A0A828U007) | Escherichia coli | |
| 19 | S (P) | Large ribosomal subunit protein bL19 | polymer | 115 | 13159.3 | 1 | UniProt (P0A7K8) | Escherichia coli | |
| 20 | T (Q) | 50S ribosomal protein L20 | polymer | 118 | 13528.0 | 1 | UniProt (B7MAS6) | Escherichia coli | |
| 21 | U (R) | Ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (C3SSG2) | Escherichia coli | |
| 22 | V (S) | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) | Escherichia coli | Large ribosomal subunit protein uL22 |
| 23 | W (T) | 50S ribosomal protein L23 | polymer | 100 | 11222.2 | 1 | UniProt (C3SQV2) | Escherichia coli | |
| 24 | X (U) | 50S ribosomal protein L24 | polymer | 104 | 11339.3 | 1 | UniProt (C3SQZ7) | Escherichia coli | |
| 25 | Y (V) | Large ribosomal subunit protein bL25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) | Escherichia coli | |
| 26 | Z (W) | Large ribosomal subunit protein bL27 | polymer | 84 | 9015.3 | 1 | UniProt (C3SSG7) | Escherichia coli | |
| 27 | AA (X) | 50S ribosomal protein L28 | polymer | 78 | 9027.6 | 1 | UniProt (A0A1X3JA73) | Escherichia coli | |
| 28 | BA (Y) | Large ribosomal subunit protein uL29 | polymer | 63 | 7286.5 | 1 | UniProt (C3SQY2) | Escherichia coli | |
| 29 | CA (Z) | 50S ribosomal protein L30 | polymer | 59 | 6554.8 | 1 | UniProt (C3SR32) | Escherichia coli | |
| 30 | DA (a) | 50S ribosomal protein L31 | polymer | 70 | 7887.1 | 1 | UniProt (P0A7M9) | Escherichia coli | Large ribosomal subunit protein bL31-A |
| 31 | EA (b) | 50S ribosomal protein L32 | polymer | 57 | 6463.4 | 1 | UniProt (C3TE02) | Escherichia coli | |
| 32 | FA (c) | 50S ribosomal protein L33 | polymer | 55 | 6388.6 | 1 | UniProt (C3SME7) | Escherichia coli | |
| 33 | GA (d) | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (B7MGC4) | Escherichia coli | |
| 34 | HA (e) | 50S ribosomal protein L35 | polymer | 65 | 7313.0 | 1 | UniProt (P0A7Q1) | Escherichia coli | Large ribosomal subunit protein bL35,Ribosomal protein A |
| 35 | IA (f) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (A0A0E2L017) | Escherichia coli | |
| 36 | JA (g) | 30S ribosomal protein S2 | polymer | 241 | 26781.7 | 1 | UniProt (C3TPN2) | Escherichia coli | |
| 37 | KA (h) | 30S ribosomal protein S3 | polymer | 233 | 26031.3 | 1 | UniProt (B7MCS9) | Escherichia coli | |
| 38 | LA (i) | 30S ribosomal protein S4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) | Escherichia coli | |
| 39 | MA (j) | 30S ribosomal protein S5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) | Escherichia coli | |
| 40 | NA (k) | 30S ribosomal protein S6 | polymer | 135 | 15727.5 | 1 | UniProt (P02358) | Escherichia coli | Small ribosomal subunit protein bS6 |
| 41 | OA (l) | Small ribosomal subunit protein uS7 | polymer | 178 | 19924.0 | 1 | UniProt (C4ZUJ6) | Escherichia coli | |
| 42 | PA (m) | Small ribosomal subunit protein uS8 | polymer | 130 | 14146.6 | 1 | UniProt (C3SR12) | Escherichia coli | |
| 43 | QA (n) | Small ribosomal subunit protein uS9 | polymer | 130 | 14886.3 | 1 | UniProt (C3SRY2) | Escherichia coli | |
| 44 | RA (o) | Small ribosomal subunit protein uS10 | polymer | 103 | 11755.6 | 1 | UniProt (C3SQT7) | Escherichia coli | |
| 45 | SA (p) | 30S ribosomal protein S11 | polymer | 129 | 13871.0 | 1 | UniProt (B7MCR3) | Escherichia coli | |
| 46 | TA (q) | Small ribosomal subunit protein uS12 | polymer | 124 | 13814.2 | 1 | UniProt (C3SQR7) | Escherichia coli | |
| 47 | UA (r) | 30S ribosomal protein S13 | polymer | 118 | 13128.5 | 1 | UniProt (A0A7U9IV78) | Escherichia coli | |
| 48 | VA (s) | Small ribosomal subunit protein uS14 | polymer | 101 | 11606.6 | 1 | UniProt (A0A2X1PQW4) | Escherichia coli | |
| 49 | WA (t) | Small ribosomal subunit protein uS15 | polymer | 89 | 10290.8 | 1 | UniProt (C3SSQ7) | Escherichia coli | |
| 50 | XA (u) | 30S ribosomal protein S16 | polymer | 82 | 9207.6 | 1 | UniProt (C3SYP2) | Escherichia coli | |
| 51 | YA (v) | Small ribosomal subunit protein uS17 | polymer | 84 | 9724.5 | 1 | UniProt (C3SQY7) | Escherichia coli | |
| 52 | ZA (w) | 30S ribosomal protein S18 | polymer | 75 | 9005.5 | 1 | UniProt (A0A0E2KXL3) | Escherichia coli | |
| 53 | AB (x) | Small ribosomal subunit protein uS19 | polymer | 92 | 10455.4 | 1 | UniProt (C3SQW2) | Escherichia coli | |
| 54 | BB (y) | 30S ribosomal protein S20 | polymer | 87 | 9708.5 | 1 | UniProt (C3TRH7) | Escherichia coli | |
| 55 | CB (z) | 30S ribosomal protein S21 | polymer | 71 | 8524.0 | 1 | UniProt (A0A0E2L2J1) | Escherichia coli | |
| 56 | AC, AD, AE, AF, AG... (1, 2, 3, B, Q...) | MAGNESIUM ION | non-polymer | 24.3 | 395 | Chemie (MG) | |||
| 57 | AR, BR, CR, DR, ER... (S, U, W, Y, a...) | water | water | 18.0 | 1972 | Chemie (HOH) |
Sequence modifications
1: 1 - 2904 (GenBank: 2577360273)
6: 1 - 76 (GenBank: 1847302804)
| PDB | External Database | Details |
|---|---|---|
| A 887 | U 1874985 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Cm0 34 | U 1288720 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 55 |
| Total formula weight | 2194777.7 | |
| Non-Polymers* | Number of molecules | 395 |
| Total formula weight | 9600.5 | |
| All* | Total formula weight | 2204378.2 |
