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8UQ8

Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 2-residue linker

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, a)
E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/Epolymer43748807.22UniProt (Q8IYW5)
UniProt (P61077)
UniProt (Q16778)
UniProt (P04908)
Pfam (PF14447)
Pfam (PF00179)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (human)
2C, CA, D, DA, E...
(A, a)
CHLORIDE IONnon-polymer35.521Chemie (CL)
PubChem (312)
3G, H, L, Y, Z
(A, a)
GLYCEROLnon-polymer92.15Chemie (GOL)
PubChem (753)
4AA, BA, I, J
(a, A)
ZINC IONnon-polymer65.44Chemie (ZN)
5GA, HA, K, M, N
(a, A)
SODIUM IONnon-polymer23.05Chemie (NA)
PubChem (923)
6LA, MA
(A, a)
waterwater18.0192Chemie (HOH)
Sequence modifications
A, a: 1 - 94 (UniProt: Q8IYW5)
PDBExternal DatabaseDetails
Gly -1-expression tag
His 0-expression tag
Ser 95-linker
Gly 96-linker
Ser 97-linker
Gly 98-linker
Ser 99-linker
Gly 100-linker
Ser 101-linker
A, a: 1002 - 1147 (UniProt: P61077)
PDBExternal DatabaseDetails
Gly 1148-linker
Ser 1149-linker
A, a: 2033 - 2123 (UniProt: Q16778)
PDBExternal DatabaseDetails
Ser 3011-linker
A, a: 3012 - 3105 (UniProt: P04908)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight97614.4
Non-Polymers*Number of molecules35
Total formula weight1581.6
All*Total formula weight99196.0
*Water molecules are not included.

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PDB entries from 2026-03-25

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