8UQ8
Crystal structure of RNF168 (RING)-UbcH5c fused to H2A-H2B via a 2-residue linker
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, a) | E3 ubiquitin-protein ligase RNF168,Ubiquitin-conjugating enzyme E2 D3,Histone H2B type 2-E,Histone H2A type 1-B/E | polymer | 437 | 48807.2 | 2 | UniProt (Q8IYW5) UniProt (P61077) UniProt (Q16778) UniProt (P04908) Pfam (PF14447) Pfam (PF00179) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (human) | |
| 2 | C, CA, D, DA, E... (A, a) | CHLORIDE ION | non-polymer | 35.5 | 21 | Chemie (CL) PubChem (312) | |||
| 3 | G, H, L, Y, Z (A, a) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) PubChem (753) | |||
| 4 | AA, BA, I, J (a, A) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | GA, HA, K, M, N (a, A) | SODIUM ION | non-polymer | 23.0 | 5 | Chemie (NA) PubChem (923) | |||
| 6 | LA, MA (A, a) | water | water | 18.0 | 192 | Chemie (HOH) |
Sequence modifications
A, a: 1 - 94 (UniProt: Q8IYW5)
A, a: 1002 - 1147 (UniProt: P61077)
A, a: 2033 - 2123 (UniProt: Q16778)
A, a: 3012 - 3105 (UniProt: P04908)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| His 0 | - | expression tag |
| Ser 95 | - | linker |
| Gly 96 | - | linker |
| Ser 97 | - | linker |
| Gly 98 | - | linker |
| Ser 99 | - | linker |
| Gly 100 | - | linker |
| Ser 101 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 1148 | - | linker |
| Ser 1149 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ser 3011 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 97614.4 | |
| Non-Polymers* | Number of molecules | 35 |
| Total formula weight | 1581.6 | |
| All* | Total formula weight | 99196.0 |






