8UO9
Structure of synaptic vesicle protein 2A in complex with a nanobody
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Synaptic vesicle glycoprotein 2A | polymer | 680 | 75589.2 | 1 | UniProt (Q7L0J3) Pfam (PF00083) Pfam (PF07690) | Homo sapiens (human) | |
| 2 | B (B) | Nanobody | polymer | 142 | 15469.1 | 1 | Lama glama | ||
| 3 | C (D) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 4 | D, E (G, I) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 5 | F (A) | (4S)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one | non-polymer | 444.4 | 1 | Chemie (X49) | |||
| 6 | G (A) | CHOLESTEROL HEMISUCCINATE | non-polymer | 486.7 | 1 | Chemie (Y01) | |||
| 7 | H (A) | 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE] | non-polymer | 566.6 | 1 | Chemie (PS1) |
Sequence modifications
A: 64 - 742 (UniProt: Q7L0J3)
| PDB | External Database | Details |
|---|---|---|
| Met 63 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 91058.3 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1435.3 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1497.8 | |
| All* | Total formula weight | 93991.4 |
