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8UDF

Crystal structure of SARS-CoV-2 3CL protease with inhibitor DEL_7

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
3C-like proteinase nsp5polymer30633841.51UniProt (P0DTD1)
Pfam (PF05409)
Severe acute respiratory syndrome coronavirus 23CL-PRO,3CLp,Main protease,Mpro,Non-structural protein 5,nsp5,SARS coronavirus main proteinase
2B
(A)
2-cyano-D-phenylalanyl-2,4-dichloro-N-[(2S)-1-(4-fluorophenyl)-4-(methylamino)-4-oxobutan-2-yl]-D-phenylalaninamidenon-polymer598.51Chemie (WB0)
3C, D
(A)
CHLORIDE IONnon-polymer35.52Chemie (CL)
4E
(A)
SODIUM IONnon-polymer23.01Chemie (NA)
5F
(A)
waterwater18.0222Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight33841.5
Non-Polymers*Number of molecules4
Total formula weight692.4
All*Total formula weight34533.9
*Water molecules are not included.

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PDB entries from 2025-10-15

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