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8UC5

Apo X-ray crystal structure of Cyclophilin D with a surface entropy reduction mutation (K175I)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(X, A, B)
Peptidyl-prolyl cis-trans isomerase F, mitochondrialpolymer16617867.33UniProt (P30405)
Pfam (PF00160)
Homo sapiens (human)PPIase F,Cyclophilin D,CyP-D,CypD,Cyclophilin F,Mitochondrial cyclophilin,CyP-M,Rotamase F
2D, E, F, G, H...
(X, A, B)
DIMETHYL SULFOXIDEnon-polymer78.111Chemie (DMS)
3J, P
(X, A)
SODIUM IONnon-polymer23.02Chemie (NA)
4K, L, Q
(X, A)
CHLORIDE IONnon-polymer35.53Chemie (CL)
5T, U, V
(X, A, B)
waterwater18.0349Chemie (HOH)
Sequence modifications
X, A, B: 3 - 165 (UniProt: P30405)
PDBExternal DatabaseDetails
Ser 0-expression tag
Asn 1-expression tag
Ala 2-expression tag
Ile 133Lys 175engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight53602.0
Non-Polymers*Number of molecules16
Total formula weight1011.8
All*Total formula weight54613.8
*Water molecules are not included.

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PDB entries from 2025-12-10

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