8UA9
Structure of eastern equine encephalitis virus VLP unliganded quasi-threefold spike protein
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, I, M (A, E, I, M) | Envelope glycoprotein E1 | polymer | 441 | 47984.2 | 4 | UniProt (Q88678) Pfam (PF01589) | Eastern equine encephalitis virus | |
| 2 | B, F, J, N (B, F, J, N) | Structural polyprotein | polymer | 418 | 46818.7 | 4 | UniProt (Q88678) Pfam (PF00943) | Eastern equine encephalitis virus | |
| 3 | C, G, K, O (C, G, K, O) | Structural polyprotein | polymer | 54 | 6147.1 | 4 | UniProt (P08768) Pfam (PF01563) | Eastern equine encephalitis virus | |
| 4 | D, H, L, P (D, H, L, P) | Capsid protein | polymer | 260 | 29212.9 | 4 | UniProt (Q88678) Pfam (PF00944) | Eastern equine encephalitis virus | p130 |
| 5 | Q, R, S, T, U... (A, B, E, F, G...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 9 | Chemie (NAG) |
Sequence modifications
D, H, L, P: 2 - 261 (UniProt: Q88678)
| PDB | External Database | Details |
|---|---|---|
| Asn 51 | Ser 50 | conflict |
| - | Lys 74 | deletion |
| Ser 75 | Pro 75 | conflict |
| Leu 76 | Lys 76 | conflict |
| Ser 77 | Pro 77 | conflict |
| Leu 78 | Ala 78 | conflict |
| Arg 79 | Gln 79 | conflict |
| Arg 80 | Ala 80 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 520651.9 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 1990.9 | |
| All* | Total formula weight | 522642.8 |
