8UA8
Structure of Semliki Forest virus VLP in complex with VLDLR LA2
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E, I, M (A, E, I, M) | Glycoprotein E1 | polymer | 438 | 47489.8 | 4 | UniProt (A0A0F6PP03) Pfam (PF01589) UniProt (by SIFTS) (P03315) | Semliki Forest virus | |
| 2 | B, F, J, N (B, F, J, N) | Glycoprotein E2 | polymer | 417 | 46330.7 | 4 | UniProt (A0A0E3T652) Pfam (PF00943) UniProt (by SIFTS) (P03315) | Semliki Forest virus | |
| 3 | C, G, K, O (C, G, K, O) | Assembly protein E3 | polymer | 54 | 6020.9 | 4 | UniProt (P03315) Pfam (PF01563) | Semliki Forest virus | |
| 4 | D, H, L, P (D, H, L, P) | Capsid protein | polymer | 153 | 16723.9 | 4 | UniProt (P03315) Pfam (PF00944) | Semliki Forest virus | Coat protein,C |
| 5 | Q (R) | Very low-density lipoprotein receptor | polymer | 37 | 4028.2 | 1 | UniProt (P98155) Pfam (PF00057) | Homo sapiens (human) | VLDL receptor,VLDL-R |
| 6 | AA, R, U, V, W... (a, Q, U, V, W...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 6 | In PDB GlyTouCan (G42666HT) | |||
| 7 | BA, CA, S, T, Y... (b, c, S, T, Y...) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 6 | In PDB GlyTouCan (G15407YE) | |||
| 8 | DA, EA (G, K) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 9 | FA (R) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 17 |
| Total formula weight | 470289.4 | |
| Branched | Number of molecules | 12 |
| Total formula weight | 6065.7 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 482.5 | |
| All* | Total formula weight | 476837.6 |
