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8U6T

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 5-(2-(2-(3-acryloyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-1-yl)ethoxy)phenoxy)-2-naphthonitrile (JLJ758), a non-nucleoside inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Reverse transcriptase/ribonuclease Hpolymer55663932.21UniProt (P03366)Human immunodeficiency virus 1
2B
(B)
p51 RTpolymer42850039.51UniProt (P03366)Human immunodeficiency virus 1
3C
(A)
5-(2-{2-[2-oxo-3-(prop-2-enoyl)-2,3-dihydro-1H-benzimidazol-1-yl]ethoxy}phenoxy)naphthalene-2-carbonitrilenon-polymer477.51Chemie (VO8)
4D, E, F
(A)
PHOSPHATE IONnon-polymer95.03Chemie (PO4)
5G, H
(A, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6I, J
(A, B)
waterwater18.035Chemie (HOH)
Sequence modifications
A: 1 - 554 (UniProt: P03366)
PDBExternal DatabaseDetails
Met -1-expression tag
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 1 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight113971.7
Non-Polymers*Number of molecules6
Total formula weight811.0
All*Total formula weight114782.7
*Water molecules are not included.

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PDB entries from 2026-01-21

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