8TXT
Crystal structure of 05.GC.w13.02 Fab in complex with H5 HA from A/Viet Nam/1203/2004(H5N1)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, C, E | Hemagglutinin | polymer | 334 | 37948.0 | 3 | UniProt (Q5EP31) Pfam (PF00509) In PDB | Influenza A virus (A/Viet Nam/1203/2004(H5N1)) | |
2 | B, D, F | Hemagglutinin | polymer | 177 | 20414.5 | 3 | UniProt (A0A6B7HQ27) Pfam (PF00509) In PDB | Influenza A virus (A/Viet Nam/1203/2004(H5N1)) | |
3 | H, G, J | GC_W13B_B, Fab heavy chain | polymer | 225 | 23641.9 | 3 | Homo sapiens (human) | ||
4 | L, I, K | GC_w13_B, Fab light chain | polymer | 214 | 23345.8 | 3 | Homo sapiens (human) | ||
5 | M, Q | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
6 | N, O, P, R | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
7 | A, C, E, F, L... | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 7 | Chemie (NAG) |
Sequence modifications
A, C, E: 11 - 333 (UniProt: Q5EP31)
B, D, F: 1 - 174 (UniProt: A0A6B7HQ27)
PDB | External Database | Details |
---|---|---|
Ala 7 | - | expression tag |
Asp 8 | - | expression tag |
Pro 9 | - | expression tag |
Gly 10 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser 175 | - | expression tag |
Gly 176 | - | expression tag |
Arg 177 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 316050.7 | |
Branched | Number of molecules | 6 |
Total formula weight | 2870.7 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 1548.5 | |
All* | Total formula weight | 320469.8 |