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8THG

Cryo-EM structure of Nav1.7 with RLZ

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Sodium channel protein type 9 subunit alphapolymer1988226620.01UniProt (Q15858)
Pfam (PF00520)
Pfam (PF11933)
Pfam (PF06512)
Pfam (PF08016)
Homo sapiens (human)Neuroendocrine sodium channel,hNE-Na,Peripheral sodium channel 1,PN1,Sodium channel protein type IX subunit alpha,Voltage-gated sodium channel subunit alpha Nav1.7
2B
(B)
Sodium channel subunit beta-1polymer21824732.11UniProt (Q07699)
Pfam (PF07686)
Homo sapiens (human)
3C
(C)
Sodium channel subunit beta-2polymer21524355.91UniProt (O60939)
Pfam (PF07686)
Homo sapiens (human)
4D, E, F
(D, E, F)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
5G, H, U, V, W
(A, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.25Chemie (NAG)
6I
(A)
6-(trifluoromethoxy)-1,3-benzothiazol-2-aminenon-polymer234.21Chemie (657)
7J, K, T
(A)
CHOLESTEROL HEMISUCCINATEnon-polymer486.73Chemie (Y01)
8L, M, P, Q, R...
(A)
1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer510.76Chemie (LPE)
9N
(A)
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer787.11Chemie (PCW)
10O
(A)
O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serinenon-polymer792.11Chemie (P5S)
11X
(A)
waterwater18.04Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight275708.0
BranchedNumber of molecules3
Total formula weight1273.2
Non-Polymers*Number of molecules17
Total formula weight7443.9
All*Total formula weight284425.1
*Water molecules are not included.

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PDB entries from 2025-06-18

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