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8TG3

tRNA 2'-phosphotransferase (Tpt1) from Aeropyrum pernix in complex with ADP-ribose-1" -phosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AProbable RNA 2'-phosphotransferasepolymer20623382.01UniProt (Q9YFP5)
Pfam (PF01885)
In PDB
Aeropyrum pernix
2A[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphatenon-polymer639.31Chemie (HQG)
3ANITRATE IONnon-polymer62.03Chemie (NO3)
4AGLYCEROLnon-polymer92.12Chemie (GOL)
5ADI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
6APOTASSIUM IONnon-polymer39.11Chemie (K)
7waterwater18.0179Chemie (HOH)
Sequence modifications
A: 1 - 186 (UniProt: Q9YFP5)
PDBExternal DatabaseDetails
Met -19-expression tag
Gly -18-expression tag
Ser -17-expression tag
Ser -16-expression tag
His -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
Ser -9-expression tag
Ser -8-expression tag
Gly -7-expression tag
Leu -6-expression tag
Val -5-expression tag
Pro -4-expression tag
Arg -3-expression tag
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight23382.0
Non-Polymers*Number of molecules8
Total formula weight1154.7
All*Total formula weight24536.7
*Water molecules are not included.

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PDB entries from 2024-06-12

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