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8TFA

Diphosphoinositol polyphosphate phosphohydrolase 1 (DIPP1/NUDT3) in complex with myo-5-PP-IP4, produced upon myo-(2OH)-IP5 phosphorylation by TvIPK

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Diphosphoinositol polyphosphate phosphohydrolase 1polymer14817115.41UniProt (O95989)
Pfam (PF00293)
Homo sapiens (human)DIPP-1,Diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase 1,Nucleoside diphosphate-linked moiety X motif 3,Nudix motif 3
2B
(A)
(1r,2R,3S,4r,5R,6S)-4-hydroxy-2,3,5,6-tetrakis(phosphonooxy)cyclohexyl trihydrogen diphosphatenon-polymer660.01Chemie (U6J)
3C, D, E
(A)
MAGNESIUM IONnon-polymer24.33Chemie (MG)
4F
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5G
(A)
FLUORIDE IONnon-polymer19.01Chemie (F)
6H
(A)
waterwater18.0183Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight17115.4
Non-Polymers*Number of molecules6
Total formula weight787.4
All*Total formula weight17902.8
*Water molecules are not included.

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PDB entries from 2026-01-14

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