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8TA9

Sequence specific (AATT) orientation of DAPI molecules at a unique minor groove binding site (position1) within a self-assembled 3D DNA lattice (4x6)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA (5'-D(*GP*AP*GP*AP*AP*TP*TP*CP*CP*TP*GP*AP*CP*GP*GP*AP*AP*CP*TP*CP*A*(DAP))-3')polymer216456.21synthetic construct
2B
(B)
DNA (5'-D(P*CP*CP*GP*TP*CP*A)-3')polymer61769.21synthetic construct
3C
(C)
DNA (5'-D(*TP*CP*TP*GP*AP*GP*TP*T)-3')polymer82432.61synthetic construct
4D
(D)
DNA (5'-D(P*GP*GP*AP*AP*TP*TP*C)-3')polymer72137.41synthetic construct
5E, G
(A, D)
COBALT (II) IONnon-polymer58.92Chemie (CO)
6F
(D)
6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLEnon-polymer277.31Chemie (DAP)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight12795.4
Non-Polymers*Number of molecules3
Total formula weight395.2
All*Total formula weight13190.6
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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