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8T80

Sequence specific (AATT) orientation of Hoechst molecules at two unique minor groove binding sites within a self-assembled 3D DNA lattice (4x5)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ADNA (5'-D(*GP*AP*GP*AP*AP*TP*TP*CP*CP*TP*GP*AP*CP*GP*AP*CP*AP*AP*TP*TP*A)-3')polymer216455.21synthetic construct
2BDNA (5'-D(P*CP*GP*TP*CP*G)-3')polymer51496.01synthetic construct
3CDNA (5'-D(*TP*CP*TP*AP*AP*TP*TP*GP*T)-3')polymer92720.81synthetic construct
4DDNA (5'-D(P*GP*GP*AP*AP*TP*TP*C)-3')polymer72137.41synthetic construct
5AMAGNESIUM IONnon-polymer24.31Chemie (MG)
6A, D2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLEnon-polymer452.62Chemie (HT1)
7waterwater18.06Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight12809.5
Non-Polymers*Number of molecules3
Total formula weight929.4
All*Total formula weight13738.9
*Water molecules are not included.

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PDB entries from 2024-05-15

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